WK123-4688_BioSample
SARS-CoV-2: wastewater surveillance
BioSampleModel
2023-08-02T01:46:22Z
ENA-FIRST-PUBLIC
2023-08-02T01:46:22Z
ENA-LAST-UPDATE
SAMN36784274
External Id
CLT
INSDC center name
2023-08-02T01:46:22Z
INSDC first public
2023-08-02T01:46:22Z
INSDC last update
public
INSDC status
SRS18465019
SRA accession
WK123-4688_BioSample
Submitter Id
NCBI
broker name
North Carolina Department of Health and Human Services
collected_by
2023-05-23
collection_date
WK123-4688
collection_site_id
06:55
collection_time
40
collection_volume
membrane filtration with acidification and mgcl2
concentration_method
bcov vaccine
extraction_control
nuclisens manual magnetic bead extraction kit
extraction_method
USA: North Carolina
geo_loc_name
wastewater
isolation_source
wastewater metagenome
organism
wastewater metagenome
organism
Wastewater sequencing of NC Wastewater Monitoring Network samples
project_name
public health surveillance community-level
purpose_of_ww_sampling
public health surveillance for the NC Wastewater Monitoring Network
purpose_of_ww_sequencing
WK123-4688
sample_name
wilmington northside - city
sample_title
wastewater metagenome
scientific_name
University of North Carolina at Charlotte
sequenced_by
06-12-23-A4-2 BioSample
title
pepper mild mottle virus
ww_endog_control_1
racki et al. 2014; haramoto et al 201
ww_endog_control_1_protocol
2.97
ww_flow
2.0
ww_industrial_effluent_percent
58361
ww_population
census blocks clipped to wastewater service area polygon
ww_population_source
no
ww_pre_treatment
24
ww_sample_duration
raw wastewater
ww_sample_matrix
wastewater treatment plant
ww_sample_site
composite
ww_sample_type
NC
ww_surv_jurisdiction
NCWW13069
ww_surv_system_sample_id
SARS-CoV-2
ww_surv_target_1
4750
ww_surv_target_1_conc
copies/L
ww_surv_target_1_conc_unit
N gene (N1)
ww_surv_target_1_gene
yes
ww_surv_target_1_known_present
decaro et al. detection of bovine coronavirus using a taqman-based real-time rt-pcr assay.
ww_surv_target_1_protocol
SARS-CoV-2
ww_surv_target_2
12267.87865
ww_surv_target_2_conc
copies/L
ww_surv_target_2_conc_unit
N gene (N2)
ww_surv_target_2_gene
yes
ww_surv_target_2_known_present
4
ww_temperature