230706-JBWRF4-UT
SARS-CoV-2: wastewater surveillance
BioSampleModel
2023-07-27T00:10:03Z
ENA-FIRST-PUBLIC
2023-07-27T00:10:03Z
ENA-LAST-UPDATE
SAMN36716048
External Id
pda|pgupta@utah.gov
INSDC center name
2023-07-27T00:10:03Z
INSDC first public
2023-07-27T00:10:03Z
INSDC last update
public
INSDC status
SRS18426227
SRA accession
230706-JBWRF4-UT
Submitter Id
NCBI
broker name
2023-07-06
collection_date
USA: Utah
geo_loc_name
wastewater
isolation_source
wastewater metagenome
organism
public health surveillance community-level
purpose_of_ww_sampling
characterize diversity of lineages and mutations across entire genome
purpose_of_ww_sequencing
wastewater metagenome
scientific_name
UPHL
sequenced_by
27557797.7584
ww_flow
94484
ww_population
https://uofuhealth.utah.edu/huntsman/utah-population-database/
ww_population_source
no
ww_pre_treatment
Promega wastewater large volume TNA capture kit,Promega automated TNA kit
ww_processing_protocol
24
ww_sample_duration
raw wastewater
ww_sample_matrix
wastewater treatment plant
ww_sample_site
composite
ww_sample_type
UT
ww_surv_jurisdiction
9662
ww_surv_system_sample_id
SARS-CoV-2
ww_surv_target_1
161230.1
ww_surv_target_1_conc
copies/L wastewater
ww_surv_target_1_conc_unit
N1 & N2 combined
ww_surv_target_1_gene
no
ww_surv_target_1_known_present
IDT Research Use Only Kit (https://www.idtdna.com/pages/landing/coronavirus-research-reagents/cdc-assays)
ww_surv_target_1_protocol