NR_051123_BioSample
SARS-CoV-2: wastewater surveillance
BioSampleModel
2023-08-07T00:48:53Z
ENA-FIRST-PUBLIC
2023-08-07T00:48:53Z
ENA-LAST-UPDATE
SAMN36861432
External Id
HARRISLAB
INSDC center name
2023-08-07T00:48:53Z
INSDC first public
2023-08-07T00:48:53Z
INSDC last update
public
INSDC status
SRS18523776
SRA accession
NR_051123_BioSample
Submitter Id
NCBI
broker name
North Carolina Department of Health and Human Services
collected_by
2023-05-10
collection_date
NR_051123
collection_site_id
07:38
collection_time
40.0
collection_volume
membrane filtration with addition of mgcl2
concentration_method
bcov vaccine
extraction_control
qiagen rneasy kit
extraction_method
USA: North Carolina
geo_loc_name
wastewater
isolation_source
wastewater metagenome
organism
wastewater metagenome
organism
Wastewater sequencing of NC Wastewater Monitoring Network samples
project_name
public health surveillance community-level
purpose_of_ww_sampling
public health surveillance for the NC Wastewater Monitoring Network
purpose_of_ww_sequencing
NR_051123
sample_name
raleigh 1
sample_title
wastewater metagenome
scientific_name
North Carolina State University
sequenced_by
Batch_215_E6440 BioSample
title
49.6
ww_flow
6.9
ww_ph
550000.0
ww_population
census blocks clipped to wastewater service area polygon
ww_population_source
no
ww_pre_treatment
24.0
ww_sample_duration
raw wastewater
ww_sample_matrix
wastewater treatment plant
ww_sample_site
composite
ww_sample_type
NC
ww_surv_jurisdiction
NCSU000944
ww_surv_system_sample_id
SARS-CoV-2
ww_surv_target_1
25180.0
ww_surv_target_1_conc
copies/L
ww_surv_target_1_conc_unit
N gene (N1)
ww_surv_target_1_gene
yes
ww_surv_target_1_known_present
us cdc real-time reverse transcription pcr panel for detection of severe acute respiratory syndrome coronavirus 2; https://wwwnc.cdc.gov/eid/article/26/8/20-1246_article
ww_surv_target_1_protocol
SARS-CoV-2
ww_surv_target_2
13271.0
ww_surv_target_2_conc
copies/L
ww_surv_target_2_conc_unit
N gene (N2)
ww_surv_target_2_gene
yes
ww_surv_target_2_known_present
4.0
ww_temperature