230718-CWSD19-UT
SARS-CoV-2: wastewater surveillance
BioSampleModel
2023-08-03T00:11:26Z
ENA-FIRST-PUBLIC
2023-08-03T00:11:26Z
ENA-LAST-UPDATE
SAMN36808113
External Id
pda|pgupta@utah.gov
INSDC center name
2023-08-03T00:11:26Z
INSDC first public
2023-08-03T00:11:26Z
INSDC last update
public
INSDC status
SRS18480340
SRA accession
230718-CWSD19-UT
Submitter Id
NCBI
broker name
2023-07-18
collection_date
USA: Utah
geo_loc_name
wastewater
isolation_source
wastewater metagenome
organism
public health surveillance community-level
purpose_of_ww_sampling
characterize diversity of lineages and mutations across entire genome
purpose_of_ww_sequencing
wastewater metagenome
scientific_name
UPHL
sequenced_by
148274579.4226
ww_flow
208850
ww_population
https://uofuhealth.utah.edu/huntsman/utah-population-database/
ww_population_source
no
ww_pre_treatment
Promega wastewater large volume TNA capture kit,Promega automated TNA kit
ww_processing_protocol
24
ww_sample_duration
raw wastewater
ww_sample_matrix
wastewater treatment plant
ww_sample_site
composite
ww_sample_type
UT
ww_surv_jurisdiction
9763
ww_surv_system_sample_id
SARS-CoV-2
ww_surv_target_1
48215.7
ww_surv_target_1_conc
copies/L wastewater
ww_surv_target_1_conc_unit
N1 & N2 combined
ww_surv_target_1_gene
no
ww_surv_target_1_known_present
IDT Research Use Only Kit (https://www.idtdna.com/pages/landing/coronavirus-research-reagents/cdc-assays)
ww_surv_target_1_protocol