SARS-CoV-2: clinical or host-associated
BioSampleModel
2023-08-10T00:52:41Z
ENA-FIRST-PUBLIC
2023-08-10T00:52:41Z
ENA-LAST-UPDATE
SAMN36902916
External Id
CDC-OAMD
INSDC center name
2023-08-10T00:52:41Z
INSDC first public
2023-08-10T00:52:41Z
INSDC last update
public
INSDC status
SARS-CoV-2/Human/USA/NY-CDC-LC1047681/2023
Isolate
SRS18557476
SRA accession
SARS-CoV-2/Human/USA/NY-CDC-LC1047681/2023
Submitter Id
NCBI
broker name
Laboratory Corporation of America
collected_by
2023-07-22
collection_date
Nasal Swabs
collection_device
Nasal Swabs
collection_method
N1 gene
diagnostic_gene_name_1
N2 gene
diagnostic_gene_name_2
RP gene
diagnostic_gene_name_3
18.665
diagnostic_pcr_Ct_value_1
16.142
diagnostic_pcr_Ct_value_2
33.963
diagnostic_pcr_Ct_value_3
Labcorp LDT
diagnostic_pcr_protocol_1
Labcorp LDT
diagnostic_pcr_protocol_2
Labcorp LDT
diagnostic_pcr_protocol_3
USA: New York
geo_loc_name
Homo sapiens
host
59
host_age
COVID-19
host_disease
Unknown
host_race
female
host_sex
Nasal Swabs
isolation_source
GJ.1
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
organism
baseline surveillance (random sampling)
purpose_of_sequencing
Severe acute respiratory syndrome coronavirus 2
scientific_name
CDC Sars CoV2 Sequencing Baseline Constellation
title