2024-09-02
ENA first public
ERC000024
ENA-CHECKLIST
SAMEA111280516
External Id
Microbial ecology
INSDC center name
2022-09-02T15:54:51Z
INSDC last update
public
INSDC status
quicker
SIS transit time level
shallower
SIS vadose zone thickness level
ERS13378113
SRA accession
GB-Aval-J0
Submitter Id
groundwater (ENVO:01001004)
broad-scale environmental context
2015-09-15
collection date
2-20
m
depth
Downstream aquifer water sample from the Grange-Blanche (GB) Stormwater Infiltration System (SIS)
description
189
m
elevation
water
environmental medium
France
geographic location (country and/or sea)
45.65866096
DD
geographic location (latitude)
4.89541815
DD
geographic location (longitude)
Auvergne-Rhone-Alpes administrative region, Rhone department, Saint-Symphorien-d'Ozon town
geographic location (region and locality)
mimarks-survey
investigation type
aquifer (ENVO:00012408)
local environmental context
aquifer metagenome
organism
ILMN-PTCF2 (GTGCCGYTRTGYGGCAAGA) and ILMN-PTCF2m (GTGCCCYTRTGYGGCAAGT); ILMN-PTCR2 (ATCAKYGCGGCGCGGTCRTA) and ILMNPTCR2m (ATGAGBGCTGCCCTGTCRTA)
pcr primers
Impact of urban runoffs discharged in aquifers by stormwater infiltration systems (PRJEB55755) ANR FROG
project name
aquifer metagenome
scientific_name
Sequencing by synthesis (Illumina MiSeq Illumina V3)
sequencing method
Thiopurine S-methyltransferase (tpm)
target gene
200-235 bp, including the VPLCGK and YDRAAM conserved domains
target subfragment
aquifer water
title
water
water environmental package