2024-09-12
ENA first public
ERC000011
ENA-CHECKLIST
JIC
INSDC center name
public
INSDC status
ERS21007450
SRA accession
coassembly-bin216
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S and 5S rRNA genes and at least 18 tRNAs
assembly quality
MEGAHIT v1.2.6
assembly software
default
binning parameters
MetaBAT v2.15
binning software
urban
broad-scale environmental context
2023
collection date
94.22
completeness score
CheckM v1.2.0
completeness software
0.36
contamination score
This sample represents a MAG derived from the metagenomic samples ERS20849746,ERS20849745,ERS20849744,ERS20849743,ERS20849742,ERS20849740,ERS20849739,ERS20849738
description
concrete, tree branch, growth chamber
environmental medium
United Kingdom
geographic location (country and/or sea)
52.622034
geographic location (latitude)
1.218095
geographic location (longitude)
concrete, tree branch, growth chamber
isolation_source
ground, forest, laboratory
local environmental context
lichen metagenome
metagenomic source
Rhodopila sp.
organism
Metagenomic libraries produced from intact thalli of Xanthoria parietina
project name
ERS20849746,ERS20849745,ERS20849744,ERS20849743,ERS20849742,ERS20849740,ERS20849739,ERS20849738
sample derived from
Rhodopila sp.
scientific_name
coassembly-bin216
title