2024-09-16
ENA first public
ERC000011
ENA-CHECKLIST
SAMEA112635361
External Id
Ifremer
INSDC center name
2023-03-03T14:51:32Z
INSDC last update
public
INSDC status
ERS14627341
SRA accession
sam_157_PF_CS_T0_EP_Hc_shrimp73
Submitter Id
16S rRNA
TARGETED_LOCI
CTGTCTCTTATACACATCT
adapters
9 months
age
AOAR (Aquaculture Origin Aquaculture Raised)
aquaculture origin
SeBiMER
broker name
Ifremer, Centre Ifremer du Pacifique, Taiarapu-Ouest 98719, Polynesie francaise
collecting institution
2019-09-17
collection_date
blue shrimp
common name
Adult
dev_stage
hemolymphoid system
environment (biome)
not applicable
environment (feature)
haemolymphatic fluid
environment (material)
none
environmental package
No
environmental_sample
shrimp hemolymph, French Polynesia, cold season, t0, earthen ponds
experimental factor
French Polynesia
geographic location (country and/or sea)
-17.805325
geographic location (latitude)
-149.293029
geographic location (longitude)
Pacific Ifremer Center, Taiarapu-Ouest
geographic location (region and locality)
healthy
health or disease status of specific host
metagenome
investigation type
shrimp hemolymph
isolation_source
TATCACTCTG+AACGTTACAT
multiplex identifiers
Penaeus stylirostris
organism
515F (GTGCCAGCMGCCGCGGTAA/GTGYCAGCMGCCGCGGTAA)/806R (GGACTACHVGGGTWTCTAAT/GGACTACNVGGGTWTCTAAT)
pcr primers
comistyl
project name
French Polynesia, cold season, t0, earthen ponds, fed with Ridley Prawn MR supplemented with astaxanthin (80 ppm), shrimp73
sample_description
157_PF_CS_T0_EP_Hc_shrimp73
sample_name
Penaeus stylirostris
scientific_name
Sequencing by synthesis (Illumina)
sequencing method
female
sex
16S rRNA
target gene
V4
target subfragment
Hemolymph
tissue_type
157_PF_CS_T0_EP_Hc_shrimp73
title