2024-09-16
ENA first public
ERC000011
ENA-CHECKLIST
SAMEA112635280
External Id
Ifremer
INSDC center name
2023-03-03T15:11:02Z
INSDC last update
public
INSDC status
ERS14627260
SRA accession
sam_12_NC_WS_T4_WT_water
Submitter Id
16S rRNA
TARGETED_LOCI
CTGTCTCTTATACACATCT
adapters
not applicable
age
not applicable
aquaculture origin
SeBiMER
broker name
Ifremer, Station acquacole de Saint-Vincent, Boulouparis, Nouvelle-Caledonie
collecting institution
2019-04-08
collection_date
aquaculture metagenome
common name
not applicable
dev_stage
marine biome
environment (biome)
biomaterial containment unit
environment (feature)
saline water
environment (material)
none
environmental package
Yes
environmental_sample
water, New Caledonia, warm season, t1, water tanks
experimental factor
New Caledonia
geographic location (country and/or sea)
-21.928051
geographic location (latitude)
166.083896
geographic location (longitude)
Aquaculture Station of Saint-Vincent, BOULOUPARIS
geographic location (region and locality)
not applicable
health or disease status of specific host
metagenome
investigation type
water tanks
isolation_source
GAGGTTAGAC+AATGTATTGC
multiplex identifiers
aquaculture metagenome
organism
515F (GTGCCAGCMGCCGCGGTAA/GTGYCAGCMGCCGCGGTAA)/806R (GGACTACHVGGGTWTCTAAT/GGACTACNVGGGTWTCTAAT)
pcr primers
comistyl
project name
New Caledonia, warm season, t1, water tanks
sample_description
12_NC_WS_T4_WT_water
sample_name
aquaculture metagenome
scientific_name
Sequencing by synthesis (Illumina)
sequencing method
not applicable
sex
16S rRNA
target gene
V4
target subfragment
not applicable
tissue_type
12_NC_WS_T4_WT_water
title