2024-09-16
ENA first public
ERC000011
ENA-CHECKLIST
SAMEA112635331
External Id
Ifremer
INSDC center name
2023-03-03T15:11:03Z
INSDC last update
public
INSDC status
ERS14627311
SRA accession
sam_123_PF_WS_T4_EP_water
Submitter Id
16S rRNA
TARGETED_LOCI
CTGTCTCTTATACACATCT
adapters
not applicable
age
not applicable
aquaculture origin
SeBiMER
broker name
Ifremer, Centre Ifremer du Pacifique, Taiarapu-Ouest 98719, Polynesie francaise
collecting institution
2019-05-09
collection_date
pond metagenome
common name
not applicable
dev_stage
marine biome
environment (biome)
costal shrimp pond
environment (feature)
saline shrimp pond water
environment (material)
none
environmental package
Yes
environmental_sample
water, French Polynesia, warm season, t1, earthen pond
experimental factor
French Polynesia
geographic location (country and/or sea)
-17.805325
geographic location (latitude)
-149.293029
geographic location (longitude)
Pacific Ifremer Center, Taiarapu-Ouest
geographic location (region and locality)
not applicable
health or disease status of specific host
metagenome
investigation type
earthen ponds
isolation_source
GCGTATTAAT+TGCGGTGTTG
multiplex identifiers
pond metagenome
organism
515F (GTGCCAGCMGCCGCGGTAA/GTGYCAGCMGCCGCGGTAA)/806R (GGACTACHVGGGTWTCTAAT/GGACTACNVGGGTWTCTAAT)
pcr primers
comistyl
project name
French Polynesia, warm season, t1, earthen pond
sample_description
123_PF_WS_T4_EP_water
sample_name
pond metagenome
scientific_name
Sequencing by synthesis (Illumina)
sequencing method
not applicable
sex
16S rRNA
target gene
V4
target subfragment
not applicable
tissue_type
123_PF_WS_T4_EP_water
title