2024-09-19
ENA first public
ERC000047
ENA-CHECKLIST
Spribille Lab
INSDC center name
public
INSDC status
ERS20915062
SRA accession
private_T1889_metawrap_bin.4
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes_v3.13
assembly software
default
binning parameters
metaWRAP_v.1.2
binning software
Thallus of Xylographa carneopallida lichen
broad-scale environmental context
2019-04-07
collection date
85.39
%
completeness score
CheckM_v1.1.3
completeness software
1.41
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR18162820 of study SRP361743.
description
lichen thallus
environmental medium
Canada
geographic location (country and/or sea)
53.54111800
DD
geographic location (latitude)
-117.12144300
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
lichen metagenome
isolation_source
lichen thallus
local environmental context
lichen metagenome
metagenomic source
uncultured Acetobacteraceae bacterium
organism
The genome sequences provided here are part of a study on the CAZyme arsenal of lichen fungal symbionts from the Lecanoromycetes in the context of other (previously published) fungi from other groups of the Ascomycota.
project name
SAMN25961871
sample derived from
uncultured Acetobacteraceae bacterium
scientific_name
Illumina HiSeq X
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: private_T1889_metawrap_bin.4
title