2024-09-19
ENA first public
ERC000047
ENA-CHECKLIST
Spribille Lab
INSDC center name
public
INSDC status
ERS20918198
SRA accession
public_SRR14721970_metabat2_bin.1
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes_v3.13
assembly software
default
binning parameters
metaWRAP_v.1.2
binning software
Thallus of Leucodecton sp. Tripp_6156_NY-2796959 lichen
broad-scale environmental context
2016-12-15
collection date
93.61
%
completeness score
EukCC_v2
completeness software
0.38
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR14721970 of study SRP322526.
description
lichen thallus
environmental medium
USA
geographic location (country and/or sea)
34.47170000
DD
geographic location (latitude)
-86.05110000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
lichen metagenome
isolation_source
lichen thallus
local environmental context
lichen metagenome
metagenomic source
Leucodecton sp. Tripp_6156_NY-2796959
organism
Genome sequences from the NSF Dimensions in Biodiversity Grant to study the Lichens of the Southern Appalachians
project name
SAMN19302736
sample derived from
Leucodecton sp. Tripp_6156_NY-2796959
scientific_name
Illumina HiSeq 2000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: public_SRR14721970_metabat2_bin.1
title