2024-09-19
ENA first public
ERC000047
ENA-CHECKLIST
Spribille Lab
INSDC center name
public
INSDC status
ERS20914785
SRA accession
public_SRR11456913_metawrap_bin.18
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes_v3.13
assembly software
default
binning parameters
metaWRAP_v.1.2
binning software
Thallus of Peltigera malacea lichen
broad-scale environmental context
2013-08-16
collection date
95.21
%
completeness score
CheckM_v1.1.3
completeness software
1.78
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR11456913 of study SRP254726.
description
lichen thallus
environmental medium
Canada
geographic location (country and/or sea)
58.00000000
DD
geographic location (latitude)
-111.00000000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
lichen metagenome
isolation_source
lichen thallus
local environmental context
lichen metagenome
metagenomic source
uncultured Solirubrobacteraceae bacterium
organism
Metagenomics of the Peltigera-Nostoc symbiosis
project name
SAMN14483417
sample derived from
uncultured Solirubrobacteraceae bacterium
scientific_name
Illumina HiSeq 4000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: public_SRR11456913_metawrap_bin.18
title