2024-09-19
ENA first public
ERC000047
ENA-CHECKLIST
Spribille Lab
INSDC center name
public
INSDC status
ERS20914760
SRA accession
public_SRR14722272_metawrap_bin.1
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes_v3.13
assembly software
default
binning parameters
metaWRAP_v.1.2
binning software
Thallus of Lepraria leprolomopsis lichen
broad-scale environmental context
2016-12-29
collection date
54.05
%
completeness score
CheckM_v1.1.3
completeness software
0.0
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR14722272 of study SRP322526.
description
lichen thallus
environmental medium
USA
geographic location (country and/or sea)
34.30800000
DD
geographic location (latitude)
-87.50314000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
lichen metagenome
isolation_source
lichen thallus
local environmental context
lichen metagenome
metagenomic source
uncultured Acidobacteriaceae bacterium
organism
Genome sequences from the NSF Dimensions in Biodiversity Grant to study the Lichens of the Southern Appalachians
project name
SAMN19302833
sample derived from
uncultured Acidobacteriaceae bacterium
scientific_name
Illumina HiSeq 2000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: public_SRR14722272_metawrap_bin.1
title