2024-09-19
ENA first public
ERC000047
ENA-CHECKLIST
Spribille Lab
INSDC center name
public
INSDC status
ERS20918109
SRA accession
public_SRR11456919_metabat2_bin.15
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes_v3.13
assembly software
default
binning parameters
metaWRAP_v.1.2
binning software
Thallus of Solorina crocea lichen
broad-scale environmental context
2016-08-07
collection date
99.25
%
completeness score
EukCC_v2
completeness software
1.5
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR11456919 of study SRP254726.
description
lichen thallus
environmental medium
Finland
geographic location (country and/or sea)
68.00000000
DD
geographic location (latitude)
24.00000000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
lichen metagenome
isolation_source
lichen thallus
local environmental context
lichen metagenome
metagenomic source
Solorina crocea
organism
Metagenomics of the Peltigera-Nostoc symbiosis
project name
SAMN14483411
sample derived from
Solorina crocea
scientific_name
Illumina HiSeq 4000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: public_SRR11456919_metabat2_bin.15
title