2024-09-19
ENA first public
ERC000047
ENA-CHECKLIST
Spribille Lab
INSDC center name
public
INSDC status
ERS20917916
SRA accession
public_SRR14722163_concoct_bin.11
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes_v3.13
assembly software
default
binning parameters
metaWRAP_v.1.2
binning software
Thallus of Tephromela atra lichen
broad-scale environmental context
2016-03-14
collection date
85.71
%
completeness score
EukCC_v2
completeness software
0.0
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR14722163 of study SRP322526.
description
lichen thallus
environmental medium
USA
geographic location (country and/or sea)
35.13560000
DD
geographic location (latitude)
-83.19110000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
lichen metagenome
isolation_source
lichen thallus
local environmental context
lichen metagenome
metagenomic source
Lecanora atra
organism
Genome sequences from the NSF Dimensions in Biodiversity Grant to study the Lichens of the Southern Appalachians
project name
SAMN19302559
sample derived from
Lecanora atra
scientific_name
Illumina HiSeq 2000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: public_SRR14722163_concoct_bin.11
title