2024-09-19
ENA first public
ERC000047
ENA-CHECKLIST
Spribille Lab
INSDC center name
public
INSDC status
ERS20918177
SRA accession
public_SRR14722090_metabat2_bin.14
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes_v3.13
assembly software
default
binning parameters
metaWRAP_v.1.2
binning software
Thallus of Acarospora sp. Tripp_6053_NY-2858381 lichen
broad-scale environmental context
2016-10-28
collection date
90.98
%
completeness score
EukCC_v2
completeness software
0.38
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR14722090 of study SRP322526.
description
lichen thallus
environmental medium
USA
geographic location (country and/or sea)
35.48351100
DD
geographic location (latitude)
-83.81475800
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
lichen metagenome
isolation_source
lichen thallus
local environmental context
lichen metagenome
metagenomic source
Acarospora sp. Tripp_6053_NY-2858381
organism
Genome sequences from the NSF Dimensions in Biodiversity Grant to study the Lichens of the Southern Appalachians
project name
SAMN19302625
sample derived from
Acarospora sp. Tripp_6053_NY-2858381
scientific_name
Illumina HiSeq 2000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: public_SRR14722090_metabat2_bin.14
title