2024-09-19
ENA first public
ERC000047
ENA-CHECKLIST
Spribille Lab
INSDC center name
public
INSDC status
ERS20914712
SRA accession
private_T1888_metawrap_bin.13
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes_v3.13
assembly software
default
binning parameters
metaWRAP_v.1.2
binning software
Thallus of Puttea exsequens lichen
broad-scale environmental context
2017-09-30
collection date
91.82
%
completeness score
CheckM_v1.1.3
completeness software
0.93
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR18162832 of study SRP361743.
description
lichen thallus
environmental medium
Canada
geographic location (country and/or sea)
56.58416700
DD
geographic location (latitude)
-119.70971700
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
lichen metagenome
isolation_source
lichen thallus
local environmental context
lichen metagenome
metagenomic source
uncultured Fimbriimonas sp.
organism
The genome sequences provided here are part of a study on the CAZyme arsenal of lichen fungal symbionts from the Lecanoromycetes in the context of other (previously published) fungi from other groups of the Ascomycota.
project name
SAMN25961862
sample derived from
uncultured Fimbriimonas sp.
scientific_name
Illumina HiSeq X
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: private_T1888_metawrap_bin.13
title