2024-09-20
ENA first public
ERC000050
ENA-CHECKLIST
EMBL Heidelberg
INSDC center name
public
INSDC status
ERS21065951
SRA accession
spire_mag_01913340
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
megahit 1.2.9
assembly software
default
binning parameters
metabat 2.12.1
binning software
human digestive system
broad-scale environmental context
EBI-EMG
broker name
2013-06
collection date
61.45
%
completeness score
checkm2 0.1.3
completeness software
2.03
%
contamination score
This sample represents a Third Party Annotation (TPA) binned metagenome assembled from the metagenomic run SRR3992968 of study SRP080787.
description
not specified
environmental medium
Mongolia
geographic location (country and/or sea)
47.55000000
DD
geographic location (latitude)
106.64000000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
human gut metagenome
isolation_source
human gut
local environmental context
human gut metagenome
metagenomic source
Bacteroides uniformis
organism
Mongolian Metagenome
project name
SAMN05414902
sample derived from
Bacteroides uniformis
scientific_name
Illumina HiSeq 4000
sequencing method
multi-marker approach
taxonomic identity marker
binned metagenome: spire_mag_01913340
title