2024-09-20
ENA first public
ERC000050
ENA-CHECKLIST
EMBL Heidelberg
INSDC center name
public
INSDC status
ERS21067024
SRA accession
spire_mag_02244875
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
megahit 1.2.9
assembly software
default
binning parameters
metabat 2.12.1
binning software
human digestive system
broad-scale environmental context
EBI-EMG
broker name
2017-05-20
collection date
58.96
%
completeness score
checkm2 0.1.3
completeness software
0.49
%
contamination score
This sample represents a Third Party Annotation (TPA) binned metagenome assembled from the metagenomic run SRR8845486 of study SRP190630.
description
stool
environmental medium
China
geographic location (country and/or sea)
22.27000000
DD
geographic location (latitude)
113.46000000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
human gut metagenome
isolation_source
human gut
local environmental context
human gut metagenome
metagenomic source
Bacteroides uniformis
organism
The process that reabsorb calcium and phosphate from the bones instead of keeping these minerals just make our bones weaker, finally reach to the osteoporosis stage . The osteoporosis is a severe and common disease in elderly group, and it is the most common reason for fracture among the aged . Here we</p><p>carried out metagenomic shotgun sequencing to provide a detailed characterization of the compositional and functional features of gut microbiota change withe the bone loss .
project name
SAMN11311791
sample derived from
Bacteroides uniformis
scientific_name
BGISEQ-500
sequencing method
multi-marker approach
taxonomic identity marker
binned metagenome: spire_mag_02244875
title