2024-09-20
ENA first public
ERC000050
ENA-CHECKLIST
EMBL Heidelberg
INSDC center name
public
INSDC status
ERS21072995
SRA accession
spire_mag_02421357
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
megahit 1.2.9
assembly software
default
binning parameters
metabat 2.12.1
binning software
human digestive system
broad-scale environmental context
EBI-EMG
broker name
missing: third party data
collection date
56.73
%
completeness score
checkm2 0.1.3
completeness software
1.54
%
contamination score
This sample represents a Third Party Annotation (TPA) binned metagenome assembled from the metagenomic run ERR7342551 of study ERP129957.
description
stool
environmental medium
not provided
geographic location (country and/or sea)
missing: third party data
DD
geographic location (latitude)
missing: third party data
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
human gut metagenome
isolation_source
human gut
local environmental context
human gut metagenome
metagenomic source
Bacteroides uniformis
organism
The human microbiome is an integral component of our body and a co-determinant of several health conditions. However, how the human microbiome is shaped via person-to-person microbial transmission and the extent to which interpersonal relations impact the individual genetic makeup of the microbiome and its spread within and across populations remain largely unknown. We assessed this in >9700 gut and oral metagenomes.
project name
SAMEA10739574
sample derived from
Bacteroides uniformis
scientific_name
unspecified
sequencing method
multi-marker approach
taxonomic identity marker
binned metagenome: spire_mag_02421357
title