2024-09-25
ENA first public
ERC000011
ENA-CHECKLIST
Faculty of Biology, Medicine and Health, University of Manchester
INSDC center name
public
INSDC status
ERS20099021
SRA accession
E-MTAB-14090:OE19-SMC1
Submitter Id
ArrayExpress
broker name
OE19
cell_line
epithelial cell
cell_type
not collected
collection date
human
common name
Protocols: OE19 cells were trypsinised and collected. OE19 cells nucleic acid extraction for CUT&TAG was performed as described in Kaya-Okur H, Janssens DH, Henikoff JG, Ahmad K, Henikoff S. Efficient low-cost chromatin profiling with CUT&TAG. Nat Protoc. 2020 15:3264–3283. Libraries were constructed by amplifying transposed DNA with Illumina Nextera adapters.
description
adult
developmental stage
esophageal adenocarcinoma
disease
ERBB-2amplified
genotype
not collected
geographic location (country and/or sea)
not applicable
isolate
Homo sapiens
organism
Homo sapiens
organism
esophagus
organism part
Homo sapiens
scientific_name
OE19-SMC1
title