2024-09-25
ENA first public
ERC000011
ENA-CHECKLIST
Faculty of Biology, Medicine and Health, University of Manchester
INSDC center name
public
INSDC status
ERS20099024
SRA accession
E-MTAB-14091:Patient1_OAC
Submitter Id
ArrayExpress
broker name
not collected
collection date
human
common name
Protocols: The biopsies were collected from routine endoscopies. nuclei from patient samples nucleic acid extraction for KAS-seq was performed as described in Wu T, Lyu R, You Q, He C. Kethoxal-assisted single-stranded DNA sequencing captures global transcription dynamics and enhancer activity in situ. Nat Methods. 2020 17:515–523. Libraries were constructed by amplifying transposed DNA with Illumina Nextera adapters.
description
esophageal adenocarcinoma
disease
not collected
geographic location (country and/or sea)
not applicable
isolate
Homo sapiens
organism
Homo sapiens
organism
esophagus
organism part
endoscopy biopsy
sampling site
Homo sapiens
scientific_name
Patient1_OAC
title