2024-09-26
ENA first public
ERC000024
ENA-CHECKLIST
Ifremer
INSDC center name
public
INSDC status
ERS20924583
SRA accession
sam_NC_BID02
Submitter Id
COX1
TARGETED_LOCI
missing: control sample
broad-scale environmental context
SeBiMER
broker name
PDG-ODE-LITTORAL-LERBO
collected_by
IFREMER
collecting institution
missing: control sample
collection date
PDG-ODE-LITTORAL-LERBO
collector name
seawater metagenome
common name
missing: control sample
m
depth
missing: control sample
m
elevation
missing: control sample
environmental medium
water
environmental package
no
environmental_sample
France
geographic location (country and/or sea)
missing: control sample
DD
geographic location (latitude)
missing: control sample
DD
geographic location (longitude)
missing: control sample
geographic location (region and locality)
metagenome
investigation type
negative control
isolation_source
missing: control sample
local environmental context
TATGTCAG
multiplex identifiers
seawater metagenome
organism
F: GGWACWGGWTGAACWGTWTAYCCYCC  /  R: TAIACYTCIGGRTGICCRAARAAYCA
pcr primers
ROME
project name
33.8
psu
salinity
12.8
psu
sample temperature
negative control with barcoded identifiers "BID02"
sample_description
NC_BID02
sample_name
seawater metagenome
scientific_name
Sequencing by synthesis (Illumina)
sequencing method
COX1
target gene
LEB_NC_BID02
title