2024-09-26
ENA first public
ERC000024
ENA-CHECKLIST
Ifremer
INSDC center name
public
INSDC status
ERS20924540
SRA accession
sam_P20EAA-MO038-20
Submitter Id
COX1
TARGETED_LOCI
ocean
broad-scale environmental context
SeBiMER
broker name
PDG-ODE-LITTORAL-LERPC
collected_by
IFREMER
collecting institution
2020-10-19
collection date
PDG-ODE-LITTORAL-LERPC
collector name
seawater metagenome
common name
not collected
m
depth
not provided
m
elevation
coastal sea water
environmental medium
water
environmental package
yes
environmental_sample
France
geographic location (country and/or sea)
45.7983
DD
geographic location (latitude)
-1.1398
DD
geographic location (longitude)
Marennes Oleron
geographic location (region and locality)
metagenome
investigation type
coastal sea water
isolation_source
not provided
local environmental context
TGACATCA
multiplex identifiers
seawater metagenome
organism
F: GGWACWGGWTGAACWGTWTAYCCYCC  /  R: TAIACYTCIGGRTGICCRAARAAYCA
pcr primers
ROME
project name
33.5
psu
salinity
14.3
psu
sample temperature
Sample 038 of coastal sea water from Marennes Oleron collected in 2020, filtered on 20m filter. Sequenced for protist analysis purpose in run1.
sample_description
P20EAA-MO038-20
sample_name
seawater metagenome
scientific_name
Sequencing by synthesis (Illumina)
sequencing method
COX1
target gene
LEB_20EAA-MO038-20DNA
title