2024-09-26
ENA first public
ERC000024
ENA-CHECKLIST
Ifremer
INSDC center name
public
INSDC status
ERS20924581
SRA accession
sam_P20EQ-RB01-20
Submitter Id
COX1
TARGETED_LOCI
not provided
broad-scale environmental context
SeBiMER
broker name
PDG-ODE-LITTORAL-LERBO
collected_by
IFREMER
collecting institution
2020-10-27
collection date
PDG-ODE-LITTORAL-LERBO
collector name
seawater metagenome
common name
not collected
m
depth
not provided
m
elevation
not provided
environmental medium
water
environmental package
no
environmental_sample
France
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
Rade de Brest
geographic location (region and locality)
metagenome
investigation type
control sample
isolation_source
not provided
local environmental context
GTCACGTC
multiplex identifiers
seawater metagenome
organism
F: GGWACWGGWTGAACWGTWTAYCCYCC  /  R: TAIACYTCIGGRTGICCRAARAAYCA
pcr primers
ROME
project name
Sample 01 of ultra pure water filtered on 20m filter, used as control sample for some samples from Rade de Brest collected in 2020. Sequenced for protist analysis purpose in run1.
sample_description
P20EQ-RB01-20
sample_name
seawater metagenome
scientific_name
Sequencing by synthesis (Illumina)
sequencing method
COX1
target gene
LEB_blanc_20EQ-RB01-20_20um_A0
title