2024-09-26
ENA first public
ERC000024
ENA-CHECKLIST
Ifremer
INSDC center name
public
INSDC status
ERS20924561
SRA accession
sam_P20EL-ET007-20
Submitter Id
COX1
TARGETED_LOCI
sea
broad-scale environmental context
SeBiMER
broker name
PDG-ODE-LITTORAL-LERLR
collected_by
IFREMER
collecting institution
2020-09-07
collection date
PDG-ODE-LITTORAL-LERLR
collector name
seawater metagenome
common name
not collected
m
depth
not provided
m
elevation
sea water
environmental medium
water
environmental package
yes
environmental_sample
France
geographic location (country and/or sea)
43.4343
DD
geographic location (latitude)
3.6647
DD
geographic location (longitude)
Etang de Thau
geographic location (region and locality)
metagenome
investigation type
offshore sea water
isolation_source
mediterranean sea
local environmental context
TGACATCA
multiplex identifiers
seawater metagenome
organism
F: GGWACWGGWTGAACWGTWTAYCCYCC  /  R: TAIACYTCIGGRTGICCRAARAAYCA
pcr primers
ROME
project name
Sample 007 of offshore sea water from Etang de Thau collected in 2020, filtered on 20m filter. Sequenced for protist analysis purpose in run1.
sample_description
P20EL-ET007-20
sample_name
seawater metagenome
scientific_name
Sequencing by synthesis (Illumina)
sequencing method
COX1
target gene
LEB_20EL-ET007-20DNA
title