2024-10-07
ENA first public
ERC000011
ENA-CHECKLIST
Ifremer
INSDC center name
public
INSDC status
ERS20931360
SRA accession
sam_Sc185-hin_S175
Submitter Id
16S rRNA
TARGETED_LOCI
SeBiMER
broker name
UMR ENTROPIE, Universite de La Reunion
collecting institution
2020-09
collection date
Josephine Pierrat
collector name
Stichopus chloronotus
common name
coral reef
environment (biome)
marine coral reef back reef
environment (feature)
soil
environment (material)
none
environmental package
No
environmental_sample
Reunion
geographic location (country and/or sea)
1
m
geographic location (depth)
not applicable
m
geographic location (elevation)
-21,1047183333333
DD
geographic location (latitude)
55,2467016666667
DD
geographic location (longitude)
Hermitage/La Saline reef, Trou d'Eau
geographic location (region and locality)
bacteria_archaea
investigation type
hingut
isolation_source
Stichopus chloronotus
organism
see "study description"
pcr primers
Holomicro
project name
Sea cucumber bacteria isolated using DNeasy 96 PowerSoil Pro kit (Qiagen)
sample_description
Sc185-hin_S175
sample_name
Stichopus chloronotus
scientific_name
Sequencing by synthesis (Illumina)
sequencing method
16S rRNA / COI
target gene
16S: V4V5 region and V3V5 region ; COI: a 313 base pair (bp) region
target subfragment
sam_Sc185-hin_S175
title