2024-10-09
ENA first public
ERC000047
ENA-CHECKLIST
MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY
INSDC center name
public
INSDC status
ERS21132544
SRA accession
FRAM_RAS_F4_07_2017_4-MAG_6
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
Flye v2.9.1
assembly software
Default settings
binning parameters
Metabat2 v2.15
binning software
marine pelagic biome [ENVO:01000023]
broad-scale environmental context
2017-07-22
collection date
89.69
%
completeness score
CheckM v1.2.0
completeness software
2.41
%
contamination score
29.02
m
depth
Metagenome-assembled genome generated from a water column sample collected in West Spitsbergen Current, Fram Strait - specifically derived from ERR12117702,ERS16474236
description
sea water [ENVO:00002149]
environmental medium
Svalbard
geographic location (country and/or sea)
79.01
DD
geographic location (latitude)
6.96
DD
geographic location (longitude)
seawater
isolation_source
marine photic zone [ENVO:00000209]
local environmental context
marine metagenome
metagenomic source
uncultured Pseudomonadales bacterium
organism
FRAM_RAS_WSC_F4_metagenomes
project name
ERR12117702,ERS16474236
sample derived from
uncultured Pseudomonadales bacterium
scientific_name
16S rRNA gene and multi-gene marker approach
taxonomic identity marker
Fram Strait/WSC water column MAG - FRAM_RAS_F4_07_2017_4-MAG_6
title