2024-10-09
ENA first public
ERC000047
ENA-CHECKLIST
MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY
INSDC center name
public
INSDC status
ERS21132566
SRA accession
FRAM_RAS_F4_04_1920_1-MAG_13
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
Flye v2.9.1
assembly software
Default settings
binning parameters
Metabat2 v2.15
binning software
marine pelagic biome [ENVO:01000023]
broad-scale environmental context
2020-04-10
collection date
80.05
%
completeness score
CheckM v1.2.0
completeness software
2.04
%
contamination score
21.2
m
depth
Metagenome-assembled genome generated from a water column sample collected in West Spitsbergen Current, Fram Strait - specifically derived from ERR12117679,ERS16474213
description
sea water [ENVO:00002149]
environmental medium
Svalbard
geographic location (country and/or sea)
79.02
DD
geographic location (latitude)
6.97
DD
geographic location (longitude)
seawater
isolation_source
marine photic zone [ENVO:00000209]
local environmental context
marine metagenome
metagenomic source
uncultured Pseudomonadales bacterium
organism
FRAM_RAS_WSC_F4_metagenomes
project name
ERR12117679,ERS16474213
sample derived from
uncultured Pseudomonadales bacterium
scientific_name
16S rRNA gene and multi-gene marker approach
taxonomic identity marker
Fram Strait/WSC water column MAG - FRAM_RAS_F4_04_1920_1-MAG_13
title