2024-10-28
ENA first public
ERC000013
ENA-CHECKLIST
SAMEA111528706
External Id
Earth Hologenome Iniatiative
INSDC center name
2022-10-28T14:32:16Z
INSDC last update
public
INSDC status
ERS13638687
SRA accession
ena-upload-cli
SUBMISSION_TOOL
0.5.3
SUBMISSION_TOOL_VERSION
AAA48
Submitter Id
AGATCGGAAGAGCACACGTCTGAACTCCAGTCA AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT
adapters
1000221 - Temperate woodland
broad-scale environmental context
2020-10-12
collection date
Animal-derived sample for hologenomic analyses
description
animal
environmental medium
Italy
geographic location (country and/or sea)
45.95
DD
geographic location (latitude)
7.51
DD
geographic location (longitude)
Anal/cloacal swab
host body product
Eastern grey squirrel
host common name
59.0
mm
host length
SD00356
host subject id
30640
host taxid
535.0
g
host total mass
host-associated
host-associated environmental package
metagenome
investigation type
parklike habitat
local environmental context
feces metagenome
organism
Sciurus carolinensis
project name
EHI laboratory University of Copenhagen
sample storage location
-20
°C
sample storage temperature
feces metagenome
scientific_name
Illumina NovaSeq 6000 S4 150PE
sequencing method
AAA48
title