2024-10-31
ENA first public
ERC000013
ENA-CHECKLIST
SAMEA111531769
External Id
Earth Hologenome Iniatiative
INSDC center name
2022-10-31T12:26:24Z
INSDC last update
public
INSDC status
ERS13641822
SRA accession
ena-upload-cli
SUBMISSION_TOOL
0.5.3
SUBMISSION_TOOL_VERSION
ABG37
Submitter Id
AGATCGGAAGAGCACACGTCTGAACTCCAGTCA AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT
adapters
1000221 - Temperate woodland
broad-scale environmental context
2021-03-04
collection date
Animal-derived sample for hologenomic analyses
description
animal
environmental medium
USA
geographic location (country and/or sea)
36.00
DD
geographic location (latitude)
-78.94
DD
geographic location (longitude)
Anal/cloacal swab
host body product
Eastern grey squirrel
host common name
62.0
mm
host length
SD00681
host subject id
30640
host taxid
600.0
g
host total mass
host-associated
host-associated environmental package
metagenome
investigation type
small forest patch on Duke university campus
local environmental context
feces metagenome
organism
Sciurus carolinensis
project name
EHI laboratory University of Copenhagen
sample storage location
-20
°C
sample storage temperature
feces metagenome
scientific_name
Illumina NovaSeq 6000 S4 150PE
sequencing method
ABG37
title