2024-10-31
ENA first public
ERC000013
ENA-CHECKLIST
SAMEA111531802
External Id
Earth Hologenome Iniatiative
INSDC center name
2022-10-31T12:26:25Z
INSDC last update
public
INSDC status
ERS13641855
SRA accession
ena-upload-cli
SUBMISSION_TOOL
0.5.3
SUBMISSION_TOOL_VERSION
ABW28
Submitter Id
AGATCGGAAGAGCACACGTCTGAACTCCAGTCA AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT
adapters
1000197 - Broadleaf forest
broad-scale environmental context
2021-10-20
collection date
Animal-derived sample for hologenomic analyses
description
animal
environmental medium
Germany
geographic location (country and/or sea)
52.45
DD
geographic location (latitude)
13.70
DD
geographic location (longitude)
Anal/cloacal swab
host body product
Eurasian red squirrel
host common name
56.0
mm
host length
SD01173
host subject id
55149
host taxid
400.0
g
host total mass
host-associated
host-associated environmental package
metagenome
investigation type
rural forest many oaks single conifers
local environmental context
feces metagenome
organism
Sciurus vulgaris
project name
EHI laboratory University of Copenhagen
sample storage location
-20
°C
sample storage temperature
feces metagenome
scientific_name
Illumina NovaSeq 6000 S4 150PE
sequencing method
ABW28
title