2024-10-31
ENA first public
ERC000013
ENA-CHECKLIST
SAMEA111531804
External Id
Earth Hologenome Iniatiative
INSDC center name
2022-10-31T12:26:26Z
INSDC last update
public
INSDC status
ERS13641857
SRA accession
ena-upload-cli
SUBMISSION_TOOL
0.5.3
SUBMISSION_TOOL_VERSION
ABW34
Submitter Id
AGATCGGAAGAGCACACGTCTGAACTCCAGTCA AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT
adapters
1000197 - Broadleaf forest
broad-scale environmental context
2021-10-29
collection date
Animal-derived sample for hologenomic analyses
description
animal
environmental medium
Germany
geographic location (country and/or sea)
52.49
DD
geographic location (latitude)
13.47
DD
geographic location (longitude)
Anal/cloacal swab
host body product
Eurasian red squirrel
host common name
58.0
mm
host length
SD01176
host subject id
55149
host taxid
385.0
g
host total mass
host-associated
host-associated environmental package
metagenome
investigation type
urban park with lawns and several broadleaf trees partly standing together in groups small woods
local environmental context
feces metagenome
organism
Sciurus vulgaris
project name
EHI laboratory University of Copenhagen
sample storage location
-20
°C
sample storage temperature
feces metagenome
scientific_name
Illumina NovaSeq 6000 S4 150PE
sequencing method
ABW34
title