2024-10-31
ENA first public
ERC000013
ENA-CHECKLIST
SAMEA111531758
External Id
Earth Hologenome Iniatiative
INSDC center name
2022-10-31T12:26:24Z
INSDC last update
public
INSDC status
ERS13641811
SRA accession
ena-upload-cli
SUBMISSION_TOOL
0.5.3
SUBMISSION_TOOL_VERSION
AAX97
Submitter Id
AGATCGGAAGAGCACACGTCTGAACTCCAGTCA AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT
adapters
1000248 - Dense settlement
broad-scale environmental context
2020-12-22
collection date
Animal-derived sample for hologenomic analyses
description
animal
environmental medium
France
geographic location (country and/or sea)
43.64
DD
geographic location (latitude)
3.86
DD
geographic location (longitude)
Anal/cloacal swab
host body product
Eurasian blackcap
host common name
75.0
mm
host length
SD00079
host subject id
48155
host taxid
20.5
g
host total mass
host-associated
host-associated environmental package
metagenome
investigation type
Field experiments on CNRS campus north of the city of Montpellier
local environmental context
feces metagenome
organism
Sylvia atricapilla
project name
EHI laboratory University of Copenhagen
sample storage location
-20
°C
sample storage temperature
feces metagenome
scientific_name
Illumina NovaSeq 6000 S4 150PE
sequencing method
AAX97
title