2024-10-31
ENA first public
ERC000013
ENA-CHECKLIST
SAMEA111531752
External Id
Earth Hologenome Iniatiative
INSDC center name
2022-10-31T12:26:24Z
INSDC last update
public
INSDC status
ERS13641805
SRA accession
ena-upload-cli
SUBMISSION_TOOL
0.5.3
SUBMISSION_TOOL_VERSION
AAV27
Submitter Id
AGATCGGAAGAGCACACGTCTGAACTCCAGTCA AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT
adapters
1000221 - Temperate woodland
broad-scale environmental context
2020-12-10
collection date
Animal-derived sample for hologenomic analyses
description
animal
environmental medium
Italy
geographic location (country and/or sea)
44.94
DD
geographic location (latitude)
7.59
DD
geographic location (longitude)
Anal/cloacal swab
host body product
Eastern grey squirrel
host common name
SD00429
host subject id
30640
host taxid
520.0
g
host total mass
host-associated
host-associated environmental package
metagenome
investigation type
oak-hornbeam forest
local environmental context
feces metagenome
organism
Sciurus carolinensis
project name
EHI laboratory University of Copenhagen
sample storage location
-20
°C
sample storage temperature
feces metagenome
scientific_name
Illumina NovaSeq 6000 S4 150PE
sequencing method
AAV27
title