2024-11-08
ENA first public
ERC000011
ENA-CHECKLIST
SAMEA114596847
External Id
UCSDMI
INSDC center name
2023-11-09T18:59:01Z
INSDC last update
public
INSDC status
ERS16773846
SRA accession
qiita_sid_15088:15088.UKL1961LKAP036.B.16S
Submitter Id
8
abdominal_pain_vas
no
acute_fluid_collection
no
acute_necrotic_collection
10
alcohol_units
More than 1 month no antibiotics
antibiotic_treatment_before_enrollment
no
antidiabetics
1
atlanta
no
autism
0
bisap
no
bowel_intestinal_surgery_in_past
6
bun_mg_dl
not collected
ca_mg_dl
2,15
ca_mmol_l
yes
cardiovascular_disease_in_past
no
cardiovascular_failure_grade_1
no
cardiovascular_failure_grade_2
no
cardiovascular_failure_grade_3
no
cardiovascular_failure_grade_4
UKL
center
no
cholestasis_at_time_of_enrollment
Chronic alcohol consumption
chronic_alcohol_consumption
no
chronic_constipation_in_past
no
chronic_diarrhea_in_past
no
clostridioides_diff_infection_in_past
2021
collection date
eSwab
collection_device
buccal
collection_method
2021
collection_timestamp
not collected
comment1
not collected
comment2
not collected
comment3
not collected
comment4
2
confusion_ad_admission
no
confusion_at_admission
Germany
country
0.78
crea_mg_dl
32.32
crp_mg_l
no
ct_or_sonographic_drainage
no
death
no
dementia_in_past
no
depression_in_past
P-MAPS
description
no
diabetes_mellitus_in_past
omnivour
diat
TRUE
dna_extracted
no
drainage_required
no
duodenal_obstruction
150
elevation
Host-associated
empo_1
Host-associated (non-saline)
empo_2
Animal (non-saline)
empo_3
Animal secretion (non-saline)
empo_4
urban biome
env_biome
human-associated habitat
env_feature
saliva
env_material
human-oral
env_package
no
ercp_with_papillotomy
no
ercp_with_stent_implantation
no
ercp_yes
Caucasian
ethic
alcohol
etiology
not collected
etiology_drugs
not collected
etiology_other
no
eus_drainage
no
eus_drainage_with_lams
no
eus_drainage_with_pigtails
no
extra_gastrointestinal_cancer_in_past
no
gastrointestinal_cancer_in_past
Germany:Gottingen
geo_loc_name
Germany
geographic location (country and/or sea)
120.1934
glc_mg_dl
not collected
grade_of_stool
0
haps
no
heart_failure_in_past
no
hematologic_cancer_in_past
no
hematologic_failure
no
hepatic_failure
no
hepatitis_in_past
no
hiv
37
hkt
Homo sapiens
host scientific name
60
host_age
years
host_age_units
UBERON:oral cavity
host_body_habitat
25.76298058
host_body_mass_index
UBERON:saliva
host_body_product
UBERON:buccal mucosa
host_body_site
human
host_common_name
174
host_height
cm
host_height_units
822
host_subject_id
9606
host_taxid
78
host_weight
kg
host_weight_units
no
icu_admission
no
immunosuppressant
no
infected_collection
no
inflammatory_bowel_disease
no
insulin
no
invasive_ventilation
University medical center Goettingen
irb_institute
02807
irb_protocol_id
no
irritable_stomach_bowel_disease_in_past
no
kidney_injury_akin1
no
kidney_injury_akin2
no
kidney_injury_akin3
51.53
latitude
no
laxatives
3
ldh
3
length_of_hospital_stay
short
length_of_hospital_stay_binned
6
leuk_10_3_ml
not collected
life_stage
no
liver_cirrhosis_in_past
9.93
longitude
no
mestenterial_thrombosis
no
metformin
no
nafld
no
necrosis
no
neuroleptics
no
neurologic_failure
>10 cigarettes/day
nicotine_consumption
yes
no_complication
no
no_food_intake_possible_for_24h
no
no_previous_medication
no
non_invasive_ventilation
no
nsaid
not collected
number_of_opioid_application
not collected
opioid_dose
no
opioid_intake
not collected
opioid_name
human oral metagenome
organism
not collected
origin
no
other_abdominal_surgery
no
other_antidiabetics
no
other_gastrointestinal_diseases_in_past
no
other_neurological_disease
no
other_organ_failure
no
paracetamol
no
parkinson_in_past
no
perotinitis
U Gottingen
physical_specimen_location
FALSE
physical_specimen_remaining
no
pleural_effusion
no
pm_none
no
ppi
no
pseudocyst
buccal swab
qiita_sample_type
no
respiratory_failure_grade_1
no
respiratory_failure_grade_2
no
respiratory_failure_grade_3
no
respiratory_failure_grade_4
no
rheumatic_disease_in_past
buccal swab
sample_type
human oral metagenome
scientific_name
not collected
sequencing
mild
severity
male
sex
0
sirs
not collected
specific_current_antibiotics
not collected
specific_previous_week_antibiotics
yes
statines
215.055
tag_mg_dl
>24h<1week
time_pain_hosp
15088.UKL1961LKAP036.B.16S
title
P-MAPS
title
TRUE
true_control
P-MAPS_UKL1961LKAP036_B_16S
tube_id
no
walled_off_necrosis
2021
year