2024-11-13
ENA first public
ERC000011
ENA-CHECKLIST
SAMEA113982185
External Id
Ifremer
INSDC center name
2023-07-04T10:35:50Z
INSDC last update
public
INSDC status
After total DNA extraction, performed using FastDNA Spin Kit for Soil , the seal feces microbiota composition was determined by 16S metabarcoding
LIBRARY_CONSTRUCTION_PROTOCOL
ERS15965067
SRA accession
sam_Blc-270220
Submitter Id
16S rRNA
TARGETED_LOCI
SeBiMER
broker name
not applicable
collecting institution
2020-02-27
collection date
not applicable
collector name
Blank sample
common name
not applicable
environment (biome)
not applicable
environment (feature)
not applicable
environment (material)
none
environmental package
Yes
environmental_sample
France
geographic location (country and/or sea)
not applicable
geographic location (region and locality)
bacteria_archaea
investigation type
Blank sample
isolation_source
blank sample
organism
PCR1F_460: 5'-ACGGRAGGCAGCAG-3'; PCR1R_460: 5'-TACCAGGGTATCTAATCCT-3'
pcr primers
PHOBI
project name
DNA extraction blank
sample_description
Blc-270220
sample_name
blank sample
scientific_name
Sequencing by synthesis (Illumina)
sequencing method
16S rRNA
target gene
V3-V4
target subfragment
DNA extraction blank of February 27, 2020
title