2024-11-13
ENA first public
ERC000011
ENA-CHECKLIST
SAMEA113982294
External Id
Ifremer
INSDC center name
2023-07-04T10:35:51Z
INSDC last update
public
INSDC status
After total DNA extraction, performed using FastDNA Spin Kit for Soil , the seal feces microbiota composition was determined by 16S metabarcoding
LIBRARY_CONSTRUCTION_PROTOCOL
ERS15965176
SRA accession
sam_NTC-1
Submitter Id
16S rRNA
TARGETED_LOCI
SeBiMER
broker name
not applicable
collecting institution
not provided
collection date
collector name
Blank sample
common name
not applicable
environment (biome)
not applicable
environment (feature)
not applicable
environment (material)
none
environmental package
Yes
environmental_sample
France
geographic location (country and/or sea)
not applicable
geographic location (region and locality)
bacteria_archaea
investigation type
Blank sample
isolation_source
blank sample
organism
PCR1F_460: 5'-ACGGRAGGCAGCAG-3'; PCR1R_460: 5'-TACCAGGGTATCTAATCCT-3'
pcr primers
PHOBI
project name
PCR blank
sample_description
NTC-1
sample_name
blank sample
scientific_name
Sequencing by synthesis (Illumina)
sequencing method
16S rRNA
target gene
V3-V4
target subfragment
PCR blank
title