ERC000021
ENA-CHECKLIST
European Marine Biological Resource Centre
INSDC center name
ERS16590021
SRA accession
EMOBON00086
Submitter Id
marine biome [ENVO:00000447];marine benthic biome[ENVO_01000024]
broad-scale environmental context
2021-08-25
collection date
20.54
m
depth
EMOBON metagenome sediment sample from station BPNS collected on 2021-08-25 community collected micro
description
7.19
µmol/kg
dissolved oxygen
0.4
ng/μL
dna concentration
0
m
elevation
sediment [ENVO:00002007]
environmental medium
Belgium
geographic location (country and/or sea)
51.433331
DD
geographic location (latitude)
Belgian part of the North Sea
geographic location (locality)
2.808331
DD
geographic location (longitude)
North Atlantic Ocean
geographic location (ocean)
North Sea
geographic location (region and locality)
shallow_marine_sediment_[ENVO:03000034]
local environmental context
metag
nucleic acid amplification
https://www.qiagen.com/us/products/discovery-and-translational-research/dna-rna-purification/dna-purification/microbial-dna/dneasy-powersoil-pro-kit?catno=47016
nucleic acid extraction
marine sediment metagenome
organism
DNA Polymerase:taq Q5;NoPCRs:2;PCRvolume:30;Nocycles:10
pcr conditions
metag
pcr primers
1.01100419442
atm
pressure
EMOBON
project name
Prod_ILL_BqADN_NEBUII_151_v4; Bq NEB Next Ultra II
relevant standard operating procedures
33.348
psu
salinity
Van Veen Grab
sample collection device
SoSOP3
sample collection method
SoSOP3
sample material processing
marine sediment metagenome
scientific_name
18.919
ºC
sea surface temperature
manual
sequence quality check
EMOBON_BPNS_So_210825_micro_1
source material identifiers
metag
target gene
metag
target subfragment
low
tidal stage
EMOBON_BPNS_So_11
title
26
m
total depth of water column