2024-12-05
ENA first public
ERC000022
ENA-CHECKLIST
SAMEA112193800
External Id
Metagenomic data analysis
INSDC center name
2022-12-06T11:41:11Z
INSDC last update
public
INSDC status
ERS14304877
SRA accession
ena-SAMPLE-TAB-06-12-2022-11:41:11:570-38004
Submitter Id
environmental system
broad-scale environmental context
not collected
collection date
covered by wheat crop
current land use
0.15
m
depth
Natural Agricultural Farmland soil
description
2391
m
elevation
Plant matter
environmental medium
Ethiopia
geographic location (country and/or sea)
9.09466667
DD
geographic location (latitude)
38.53880556
DD
geographic location (longitude)
Yes, Onion, Potato, Teff, Wheat
history/crop rotation
Onion,Potato, Teff,
history/previous land use
soil environment
local environmental context
rhizosphere metagenome
organism
8.16
pH
Hanna multiparamerer
pH method
Three extracts were mixed
pooling of DNA extracts (if done)
Ethiopia-Addis Ababa Science and Technology University-Bezayit-4 shotgun metagenomics 6Gb-wobi-Alicloud-AMEA2022092309
project name
Soil cone cutter
sample collection device
random sampling techniqe
sample collection method
15
g
sample volume or weight for DNA extraction
rhizosphere metagenome
scientific_name
31 sand 37 silt 32 clay
% sand/silt/clay
soil texture measurement
Hadro Method H152
soil texture method
frozen for one month before extraction
storage conditions (fresh/frozen/other)
24
ºC
temperature
BNFW
title
Walkley-Black titration by TITREX 2000
total organic C method
25
g/kg
total organic carbon