2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22357896
SRA accession
SRP186780_co1_33
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
MEGAHIT;1.2.9;default
assembly software
coverage and kmer
binning parameters
SemiBin2;2.0.2;default
binning software
host
broad-scale environmental context
2014
collection date
73.88
%
completeness score
CheckM2;1.0.2;default
completeness software
1.44
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR8618777,SRR8618778 of study SRP186780.
description
host
environmental medium
USA
geographic location (country and/or sea)
30.03
DD
geographic location (latitude)
-84.39
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
invertebrate metagenome
isolation_source
invertebrate biome
local environmental context
invertebrate metagenome
metagenomic source
uncultured Rickettsia sp.
organism
This project aimed at better understanding the evolutionary history, ecology and life style of Nephromyces, a probably mutualistic apicomplexan.
project name
SAMN10992619
sample derived from
uncultured Rickettsia sp.
scientific_name
Illumina MiSeq
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP186780_co1_33
title