2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22363038
SRA accession
SRP268394_co2_85
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
aquatic
broad-scale environmental context
2017-12-03
collection date
100
%
completeness score
CheckM2;1.0.2;default
completeness software
2.94
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR12112860,SRR12112861 of study SRP268394.
description
aquatic
environmental medium
Australia
geographic location (country and/or sea)
-33.992714
DD
geographic location (latitude)
151.231208
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
seawater metagenome
isolation_source
seawater biome
local environmental context
seawater metagenome
metagenomic source
uncultured Rhizobiaceae bacterium
organism
16S rRNA and metagenome sequencing of a manipulative experiment on the Ulva australis surface-associated bacterial community
project name
SAMN15346752,SAMN15346751
sample derived from
uncultured Rhizobiaceae bacterium
scientific_name
NextSeq 500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP268394_co2_85
title