2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22358143
SRA accession
SRP192515_co2_332
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
VAMB;3.0.2;default
binning software
aquatic
broad-scale environmental context
not provided
collection date
67.12
%
completeness score
CheckM2;1.0.2;default
completeness software
1.05
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR8893622,SRR8893623 of study SRP192515.
description
aquatic
environmental medium
China
geographic location (country and/or sea)
31.8
DD
geographic location (latitude)
118.5
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
wastewater metagenome
isolation_source
wastewater biome
local environmental context
wastewater metagenome
metagenomic source
uncultured Limnohabitans sp.
organism
Integrated metagenomic and metatranscriptomic analyses of ultraviolet disinfection effects on antibiotic resistance genes during wastewater treatment
project name
SAMN11412377,SAMN11412378
sample derived from
uncultured Limnohabitans sp.
scientific_name
Illumina HiSeq 4000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP192515_co2_332
title