2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22363342
SRA accession
SRP269274_co1_1
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT;2.15;default
binning software
host
broad-scale environmental context
2016-12-08
collection date
99.2
%
completeness score
CheckM2;1.0.2;default
completeness software
0.38
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR12112866,SRR12112868 of study SRP269274.
description
host
environmental medium
USA
geographic location (country and/or sea)
21.38
DD
geographic location (latitude)
-157.94
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
insect metagenome
isolation_source
insect biome
local environmental context
insect metagenome
metagenomic source
uncultured Rickettsia sp.
organism
Comparison of low frequency variation in the two endosymbiotic bacteria residing in the bacteriome of Macrosteles sp. nr. severini.
project name
SAMN15379311,SAMN15379309
sample derived from
uncultured Rickettsia sp.
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP269274_co1_1
title