2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22440145
SRA accession
SRP191223_co1_272
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
SemiBin2;2.0.2;default
binning software
aquatic
broad-scale environmental context
2014-10-08
collection date
96.78
%
completeness score
CheckM2;1.0.2;default
completeness software
0.36
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR8862235,SRR8862237 of study SRP191234.
description
aquatic
environmental medium
Antarctica
geographic location (country and/or sea)
-68.5958
DD
geographic location (latitude)
78.1913
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
marine metagenome
isolation_source
marine biome
local environmental context
marine metagenome
metagenomic source
uncultured Methanosarcinales archaeon
organism
Marine microbial communities from Ellis Fjord, Antarctic Ocean
project name
SAMN10864394,SAMN10864117
sample derived from
uncultured Methanosarcinales archaeon
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP191223_co1_272
title