2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22431647
SRA accession
binchicken_co183_64
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
SemiBin2;2.0.2;default
binning software
terrestrial
broad-scale environmental context
2016-08-10
collection date
82.3
%
completeness score
CheckM2;1.0.2;default
completeness software
0.12
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR6957438,SRR7975955 of study SRP138007.
description
terrestrial
environmental medium
USA
geographic location (country and/or sea)
37.876387
DD
geographic location (latitude)
-122.246777
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
surface metagenome
isolation_source
surface biome
local environmental context
surface metagenome
metagenomic source
uncultured bacterium
organism
Analysis of the solar panel surface microbial communities
project name
SAMN08776901,SAMN08779526
sample derived from
uncultured bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co183_64
title