2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22437831
SRA accession
binchicken_co3_260
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MaxBin2;2.2.7;default
binning software
aquatic
broad-scale environmental context
not provided
collection date
97.99
%
completeness score
CheckM2;1.0.2;default
completeness software
3.44
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR6183662,SRR6946416 of study SRP120194.
description
aquatic
environmental medium
USA
geographic location (country and/or sea)
47.1149
DD
geographic location (latitude)
-88.5476
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
wetland metagenome
isolation_source
wetland biome
local environmental context
wetland metagenome
metagenomic source
uncultured Terracidiphilus sp.
organism
Peatland microbial communities from PEATcosm Experiment in MTU Mesocosm Facility, Houghton
project name
SAMN07631776,SAMN08778604
sample derived from
uncultured Terracidiphilus sp.
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co3_260
title