2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22365458
SRA accession
SRP329715_co1_64
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
aquatic
broad-scale environmental context
2019-07-14
collection date
96.54
%
completeness score
CheckM2;1.0.2;default
completeness software
1.31
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR15237799,SRR15237813 of study SRP329715.
description
aquatic
environmental medium
China
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
metagenome
isolation_source
metagenome
local environmental context
metagenome
metagenomic source
uncultured Candidatus Saccharibacteria bacterium
organism
Metagenomics analysis in the pesticide wastewater treatment plants
project name
SAMN20356001,SAMN20356005
sample derived from
uncultured Candidatus Saccharibacteria bacterium
scientific_name
Illumina HiSeq 2000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP329715_co1_64
title