2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22452663
SRA accession
binchicken_co108_395
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
VAMB;3.0.2;default
binning software
engineered
broad-scale environmental context
not provided
collection date
68.92
%
completeness score
CheckM2;1.0.2;default
completeness software
1.76
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR5007144,SRR5007151 of study SRP093074.
description
engineered
environmental medium
Hong Kong
geographic location (country and/or sea)
22.28
DD
geographic location (latitude)
114.17
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
activated sludge metagenome
isolation_source
activated sludge biome
local environmental context
activated sludge metagenome
metagenomic source
uncultured Oscillospiraceae bacterium
organism
Metagenomics of anaerobic wastewater microbial communities to study anthropogenic carbon cycling
project name
SAMN05720284,SAMN05720208
sample derived from
uncultured Oscillospiraceae bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co108_395
title