2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22359116
SRA accession
SRP199154_co2_133
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT;2.15;default
binning software
engineered
broad-scale environmental context
not provided
collection date
90.32
%
completeness score
CheckM2;1.0.2;default
completeness software
3.8
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR9107545,SRR9176987 of study SRP199154.
description
engineered
environmental medium
China
geographic location (country and/or sea)
31.15
DD
geographic location (latitude)
121.42
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
bioreactor metagenome
isolation_source
bioreactor biome
local environmental context
bioreactor metagenome
metagenomic source
uncultured Coxiellaceae bacterium
organism
eDNA of AGS
project name
SAMN11812016,SAMN11930398
sample derived from
uncultured Coxiellaceae bacterium
scientific_name
Illumina HiSeq 4000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP199154_co2_133
title