2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22440148
SRA accession
binchicken_co9_189
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
Rosella;0.4.2;default
binning software
aquatic
broad-scale environmental context
not provided
collection date
91.31
%
completeness score
CheckM2;1.0.2;default
completeness software
0.12
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR7528417,SRR7528923 of study SRP154015.
description
aquatic
environmental medium
Antarctica
geographic location (country and/or sea)
-68.4725
DD
geographic location (latitude)
78.188
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
salt lake metagenome
isolation_source
salt lake biome
local environmental context
salt lake metagenome
metagenomic source
uncultured Pseudomonadota bacterium
organism
Saline water microbial communities from Ace Lake, Antarctica
project name
SAMN09200944,SAMN09202392
sample derived from
uncultured Pseudomonadota bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co9_189
title