2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22365313
SRA accession
SRP323688_co1_87
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
terrestrial
broad-scale environmental context
2018-11-20
collection date
88.89
%
completeness score
CheckM2;1.0.2;default
completeness software
4.84
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR14802572,SRR14802573 of study SRP323688.
description
terrestrial
environmental medium
Australia
geographic location (country and/or sea)
-26.44
DD
geographic location (latitude)
153.06
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
sediment metagenome
isolation_source
sediment biome
local environmental context
sediment metagenome
metagenomic source
uncultured Dehalococcoidaceae bacterium
organism
To study the microbial communities in Lake Weyba and Lake Cootharaba, Sunshine Coast, Queensland, Australia
project name
SAMN19461848,SAMN19461847
sample derived from
uncultured Dehalococcoidaceae bacterium
scientific_name
NextSeq 500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP323688_co1_87
title