2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22456089
SRA accession
binchicken_co382_46
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
MEGAHIT;1.2.9;default
assembly software
coverage and kmer
binning parameters
SemiBin2;2.0.2;default
binning software
aquatic
broad-scale environmental context
not provided
collection date
98.59
%
completeness score
CheckM2;1.0.2;default
completeness software
3.33
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR7595001,SRR7595221,SRR8816671,SRR8816758 of study SRP114822.
description
aquatic
environmental medium
Australia
geographic location (country and/or sea)
-33.990771
DD
geographic location (latitude)
151.23245
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
marine metagenome
isolation_source
marine biome
local environmental context
marine metagenome
metagenomic source
uncultured Flavobacteriaceae bacterium
organism
Marine amplicons from Australian marine (benthic and pelagic environments
project name
SAMN08954292,SAMN08954282,SAMN08954292,SAMN08954282
sample derived from
uncultured Flavobacteriaceae bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co382_46
title