2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22440070
SRA accession
binchicken_co51_202
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
SemiBin2;2.0.2;default
binning software
aquatic
broad-scale environmental context
not provided
collection date
95.92
%
completeness score
CheckM2;1.0.2;default
completeness software
0.16
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR7528923,SRR7529408 of study SRP154078.
description
aquatic
environmental medium
Antarctica
geographic location (country and/or sea)
-68.4725
DD
geographic location (latitude)
78.188
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
salt lake metagenome
isolation_source
salt lake biome
local environmental context
salt lake metagenome
metagenomic source
uncultured Candidatus Saccharibacteria bacterium
organism
Saline water microbial communities from Ace Lake, Antarctica
project name
SAMN09202392,SAMN09200906
sample derived from
uncultured Candidatus Saccharibacteria bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co51_202
title