2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22451252
SRA accession
binchicken_co292_49
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT;2.15;default
binning software
terrestrial
broad-scale environmental context
not provided
collection date
60.76
%
completeness score
CheckM2;1.0.2;default
completeness software
1.19
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR10965082,SRR10965829 of study SRP244992.
description
terrestrial
environmental medium
USA
geographic location (country and/or sea)
38.9229
DD
geographic location (latitude)
-106.9499
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
sediment metagenome
isolation_source
sediment biome
local environmental context
sediment metagenome
metagenomic source
uncultured Gemmatimonadaceae bacterium
organism
Sediment microbial communities from East River floodplain, Colorado, United States
project name
SAMN12793945,SAMN12794270
sample derived from
uncultured Gemmatimonadaceae bacterium
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co292_49
title