2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22432646
SRA accession
binchicken_co225_69
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
SemiBin2;2.0.2;default
binning software
engineered
broad-scale environmental context
not provided
collection date
59.51
%
completeness score
CheckM2;1.0.2;default
completeness software
0.05
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR11632270,SRR6986809 of study SRP258947.
description
engineered
environmental medium
China
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
drinking water metagenome
isolation_source
drinking water biome
local environmental context
drinking water metagenome
metagenomic source
uncultured Candidatus Planktophila sp.
organism
Studies of microbial communities and antibiotic resistance genes in drinking water
project name
SAMN14764030,SAMN08905216
sample derived from
uncultured Candidatus Planktophila sp.
scientific_name
Illumina HiSeq 2500,Illumina HiSeq 4000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co225_69
title