2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22433016
SRA accession
binchicken_co243_242
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
SemiBin2;2.0.2;default
binning software
aquatic
broad-scale environmental context
not provided
collection date
91.0
%
completeness score
CheckM2;1.0.2;default
completeness software
0.99
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR5459186,SRR7528924 of study SRP104306.
description
aquatic
environmental medium
Antarctica
geographic location (country and/or sea)
-68.4725
DD
geographic location (latitude)
78.188
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
salt lake metagenome
isolation_source
salt lake biome
local environmental context
salt lake metagenome
metagenomic source
uncultured Bacteroidales bacterium
organism
Seasonal variation in Antarctic microbial communities: ecology, stability and susceptibility to ecosystem change
project name
SAMN06267220,SAMN09201094
sample derived from
uncultured Bacteroidales bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co243_242
title