2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22443145
SRA accession
SRP067234_co1_8
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
MEGAHIT;1.2.9;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
aquatic
broad-scale environmental context
2008-07
collection date
98.1
%
completeness score
CheckM2;1.0.2;default
completeness software
0.09
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR2986055,SRR2989655 of study SRP067234.
description
aquatic
environmental medium
Canada
geographic location (country and/or sea)
49.2833
DD
geographic location (latitude)
-119.5833
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
freshwater sediment metagenome
isolation_source
freshwater sediment biome
local environmental context
freshwater sediment metagenome
metagenomic source
uncultured Candidatus Saccharibacteria bacterium
organism
Mahoney Lake water and sediment samples
project name
SAMN04330457,SAMN04330458
sample derived from
uncultured Candidatus Saccharibacteria bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP067234_co1_8
title