2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22458067
SRA accession
binchicken_co314_68
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT;2.15;default
binning software
engineered
broad-scale environmental context
2017-11-28
collection date
99.51
%
completeness score
CheckM2;1.0.2;default
completeness software
0.15
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs ERR3494948,ERR3494953 of study ERP116156.
description
engineered
environmental medium
United Arab Emirates
geographic location (country and/or sea)
24.413991
DD
geographic location (latitude)
54.568687
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
biofilm metagenome
isolation_source
biofilm biome
local environmental context
biofilm metagenome
metagenomic source
uncultured Hyphomicrobium sp.
organism
Metagenomic datasets for biofouling biofilm samples collected from the water cooling tower basins of two district cooling plants.
project name
SAMEA5885953,SAMEA5885958
sample derived from
uncultured Hyphomicrobium sp.
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co314_68
title