2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22192593
SRA accession
SRP242652_co1_16
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
host
broad-scale environmental context
2017-07-28
collection date
81.74
%
completeness score
CheckM2;1.0.2;default
completeness software
2.15
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR10912415,SRR10912417 of study SRP242652.
description
host
environmental medium
China
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
gut metagenome
isolation_source
gut biome
local environmental context
gut metagenome
metagenomic source
uncultured Oscillospiraceae bacterium
organism
gut microbial community diversity and function
project name
SAMN13874806,SAMN13874804
sample derived from
uncultured Oscillospiraceae bacterium
scientific_name
HiSeq X Ten
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP242652_co1_16
title