2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22432763
SRA accession
binchicken_co22_256
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
VAMB;3.0.2;default
binning software
engineered
broad-scale environmental context
2019-12-01
collection date
100
%
completeness score
CheckM2;1.0.2;default
completeness software
0.87
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR13236726,SRR13236869 of study SRP297330.
description
engineered
environmental medium
China
geographic location (country and/or sea)
22.54
DD
geographic location (latitude)
114.08
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
metagenome
isolation_source
metagenome
local environmental context
metagenome
metagenomic source
uncultured bacterium
organism
In this study, the effects of different proportions of intermediates (ethanol, acetate, and propionate) on the methanogenic activities and microbial communities were examined by operating four anaerobic sequencing batch reactors.
project name
SAMN17005576,SAMN17005578
sample derived from
uncultured bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co22_256
title