2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22451454
SRA accession
binchicken_co12_232
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
SemiBin2;2.0.2;default
binning software
engineered
broad-scale environmental context
2015-06-16
collection date
96.67
%
completeness score
CheckM2;1.0.2;default
completeness software
3.64
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR4236673,SRR5007245 of study SRP089275.
description
engineered
environmental medium
Canada
geographic location (country and/or sea)
49.25
DD
geographic location (latitude)
-123.1
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
activated sludge metagenome
isolation_source
activated sludge biome
local environmental context
activated sludge metagenome
metagenomic source
uncultured Nitrospirales bacterium
organism
Metagenomics of anaerobic wastewater microbial communities to study anthropogenic carbon cycling
project name
SAMN05720170,SAMN05720195
sample derived from
uncultured Nitrospirales bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co12_232
title