2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22360070
SRA accession
SRP216815_co1_10
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
engineered
broad-scale environmental context
not provided
collection date
99.26
%
completeness score
CheckM2;1.0.2;default
completeness software
6.98
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR9860462,SRR9860463 of study SRP216815.
description
engineered
environmental medium
China
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
sludge metagenome
isolation_source
sludge biome
local environmental context
sludge metagenome
metagenomic source
uncultured Brachymonas sp.
organism
microbial culture of different carbon-nitrogen ratio in EGSB reactor.
project name
SAMN12340438,SAMN12340439
sample derived from
uncultured Brachymonas sp.
scientific_name
Illumina HiSeq 2000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP216815_co1_10
title