2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22432047
SRA accession
binchicken_co200_328
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
MEGAHIT;1.2.9;default
assembly software
coverage and kmer
binning parameters
VAMB;3.0.2;default
binning software
engineered
broad-scale environmental context
2018-08
collection date
86.56
%
completeness score
CheckM2;1.0.2;default
completeness software
1.95
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR13076506,SRR13076528 of study SRP292972.
description
engineered
environmental medium
USA
geographic location (country and/or sea)
37.23
DD
geographic location (latitude)
-80.41
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
bioreactor metagenome
isolation_source
bioreactor biome
local environmental context
bioreactor metagenome
metagenomic source
uncultured Verrucomicrobiota bacterium
organism
Reclaiming wastewater treatment plant effluent for reuse is essential for achieving water sustainability. This project aimed to improve understanding of treatment and management requirements for reclaimed water distribution by running a long-term simulated reclaimed water distribution system experiment. Metagenomic samples were collected from water, biofilm and sediment in the distribution system and analyzed for community structure, function and presence of antibiotic resistance genes and pathogens.
project name
SAMN16823277,SAMN16823275
sample derived from
uncultured Verrucomicrobiota bacterium
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co200_328
title