2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22458760
SRA accession
binchicken_co67_257
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
SemiBin2;2.0.2;default
binning software
host
broad-scale environmental context
not provided
collection date
81.83
%
completeness score
CheckM2;1.0.2;default
completeness software
2.31
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR8439058,SRR8439236 of study SRP178957.
description
host
environmental medium
Pacific Ocean
geographic location (country and/or sea)
9.8441
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
epibiont metagenome
isolation_source
epibiont biome
local environmental context
epibiont metagenome
metagenomic source
uncultured Spirochaetales bacterium
organism
Tube worm associated microbial communities from hydrothermal vent at the East Pacific Rise, Pacific Ocean
project name
SAMN10350737,SAMN10350640
sample derived from
uncultured Spirochaetales bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co67_257
title