2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22187627
SRA accession
ERP123703_co1_64
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
host
broad-scale environmental context
not provided
collection date
84.95
%
completeness score
CheckM2;1.0.2;default
completeness software
1.66
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs ERR4583371,ERR4844152 of study ERP123703.
description
host
environmental medium
not provided
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
metagenome
isolation_source
metagenome
local environmental context
metagenome
metagenomic source
uncultured Oscillospiraceae bacterium
organism
Diversity and function of Siganus canaliculatus intestinal microbiome under different diets intervention
project name
SAMEA7302584,SAMEA7578934
sample derived from
uncultured Oscillospiraceae bacterium
scientific_name
Illumina MiSeq
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: ERP123703_co1_64
title