2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22274049
SRA accession
SRP285395_co2_44
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
aquatic
broad-scale environmental context
not provided
collection date
97.24
%
completeness score
CheckM2;1.0.2;default
completeness software
0.02
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR12712853,SRR12712864 of study SRP285395.
description
aquatic
environmental medium
Portugal
geographic location (country and/or sea)
41.24
DD
geographic location (latitude)
-8.65
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
wastewater metagenome
isolation_source
wastewater biome
local environmental context
wastewater metagenome
metagenomic source
uncultured Candidatus Saccharibacteria bacterium
organism
This project aimed at assessing variations on the composition of bacterial communities inhabiting treated effluents of urban wastewater treatement plants (WWTP) upon ozonation and direct storage of the ozonated water. In addition, it aimed as assessing if the major taxa surviving storage could also survive in a pristine environment (sterile mineral water). The data obtained would permit to conclude if the presence of ozonation by-products are relevant for the selection of the surviving bacteria, or not.
project name
SAMN16205312,SAMN16205311
sample derived from
uncultured Candidatus Saccharibacteria bacterium
scientific_name
NextSeq 550
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP285395_co2_44
title