2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22431851
SRA accession
binchicken_co190_64
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
engineered
broad-scale environmental context
not provided
collection date
76.08
%
completeness score
CheckM2;1.0.2;default
completeness software
2.04
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR11031518,SRR12489248 of study SRP247456.
description
engineered
environmental medium
China
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
sludge metagenome
isolation_source
sludge biome
local environmental context
sludge metagenome
metagenomic source
uncultured Caldisericales bacterium
organism
Control the development of ARGs by Biochemical method
project name
SAMN14048028,SAMN15870264
sample derived from
uncultured Caldisericales bacterium
scientific_name
Illumina HiSeq 2500,Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co190_64
title