2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22444032
SRA accession
SRP093762_co1_173
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
VAMB;3.0.2;default
binning software
engineered
broad-scale environmental context
2014-07
collection date
92.42
%
completeness score
CheckM2;1.0.2;default
completeness software
0.64
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR5161795,SRR5161805 of study SRP093762.
description
engineered
environmental medium
Brazil
geographic location (country and/or sea)
-6.4432151
DD
geographic location (latitude)
-50.0358394
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
mine drainage metagenome
isolation_source
mine drainage biome
local environmental context
mine drainage metagenome
metagenomic source
uncultured Candidatus Saccharibacteria bacterium
organism
Our study explored the taxonomic and functional diversity in tailings dam and acid mine drainage samples from a brazilian copper mine.
project name
SAMN06212482
sample derived from
uncultured Candidatus Saccharibacteria bacterium
scientific_name
Illumina MiSeq
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP093762_co1_173
title