2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22273974
SRA accession
SRP285395_co1_28
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
aquatic
broad-scale environmental context
not provided
collection date
99.73
%
completeness score
CheckM2;1.0.2;default
completeness software
0.05
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR12712864,SRR12712865 of study SRP285395.
description
aquatic
environmental medium
Portugal
geographic location (country and/or sea)
41.24
DD
geographic location (latitude)
-8.65
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
wastewater metagenome
isolation_source
wastewater biome
local environmental context
wastewater metagenome
metagenomic source
uncultured Rickettsiaceae bacterium
organism
This project aimed at assessing variations on the composition of bacterial communities inhabiting treated effluents of urban wastewater treatement plants (WWTP) upon ozonation and direct storage of the ozonated water. In addition, it aimed as assessing if the major taxa surviving storage could also survive in a pristine environment (sterile mineral water). The data obtained would permit to conclude if the presence of ozonation by-products are relevant for the selection of the surviving bacteria, or not.
project name
SAMN16205311,SAMN16205310
sample derived from
uncultured Rickettsiaceae bacterium
scientific_name
NextSeq 550
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP285395_co1_28
title