2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22357132
SRA accession
SRP167671_co2_134
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT;2.15;default
binning software
aquatic
broad-scale environmental context
2017-05
collection date
96.92
%
completeness score
CheckM2;1.0.2;default
completeness software
1.07
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR8146440,SRR8146441 of study SRP167671.
description
aquatic
environmental medium
China
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
seawater metagenome
isolation_source
seawater biome
local environmental context
seawater metagenome
metagenomic source
uncultured Fibrobacteraceae bacterium
organism
Microbial biochemical process in O2-deficit marine environment
project name
SAMN10363505,SAMN10363504
sample derived from
uncultured Fibrobacteraceae bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP167671_co2_134
title