2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22433028
SRA accession
binchicken_co245_103
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
aquatic
broad-scale environmental context
2017-04-01
collection date
65.14
%
completeness score
CheckM2;1.0.2;default
completeness software
1.31
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR11744887,SRR11744889 of study SRP260942.
description
aquatic
environmental medium
not provided
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
freshwater sediment metagenome
isolation_source
freshwater sediment biome
local environmental context
freshwater sediment metagenome
metagenomic source
uncultured Candidatus Saccharibacteria bacterium
organism
The goal of this research is to analyze the effect of the addition of iron oxides and dissimilated metal-reducing bacteria on the methanogenic metabolism of the constructed wetland matrix system through the results of metagenomic sequencing.
project name
SAMN09622156,SAMN09622154
sample derived from
uncultured Candidatus Saccharibacteria bacterium
scientific_name
Illumina HiSeq 4000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co245_103
title