2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22432461
SRA accession
binchicken_co214_75
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
engineered
broad-scale environmental context
2019-12-10
collection date
87.81
%
completeness score
CheckM2;1.0.2;default
completeness software
5.59
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR11802610,SRR11802611 of study SRP261981.
description
engineered
environmental medium
China
geographic location (country and/or sea)
31.33
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
metagenome
isolation_source
metagenome
local environmental context
metagenome
metagenomic source
uncultured Allorhizobium sp.
organism
Impact of Tetracycline on biofilm microbial communities
project name
SAMN14941005,SAMN14941004
sample derived from
uncultured Allorhizobium sp.
scientific_name
HiSeq X Ten
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co214_75
title