2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22361141
SRA accession
DRP004690_co1_3
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
aquatic
broad-scale environmental context
2013-09
collection date
73.21
%
completeness score
CheckM2;1.0.2;default
completeness software
1.63
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs DRR163692,DRR163693 of study DRP004690.
description
aquatic
environmental medium
Japan
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
hot springs metagenome
isolation_source
hot springs biome
local environmental context
hot springs metagenome
metagenomic source
uncultured Nitrososphaerales archaeon
organism
Metagenomic sequencing analysis of the 9 hot springs in the Kirishima region in Kyushu's Kagoshima prefecture.
project name
SAMD00155371,SAMD00155372
sample derived from
uncultured Nitrososphaerales archaeon
scientific_name
Illumina MiSeq
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: DRP004690_co1_3
title