2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22460787
SRA accession
binchicken_co309_41
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
aquatic
broad-scale environmental context
2014-07-31
collection date
75.06
%
completeness score
CheckM2;1.0.2;default
completeness software
2.46
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR7760390 of study SRP158973.
description
aquatic
environmental medium
USA
geographic location (country and/or sea)
47.49000000
DD
geographic location (latitude)
-92.57000000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
aquatic metagenome
isolation_source
aquatic biome
local environmental context
aquatic metagenome
metagenomic source
uncultured Mariniplasma sp.
organism
In this project, we combined mercury geochemistry, hgcA gene cloning, rRNA methods, and metagenomics to compare microbial communities associated with methylmercury production in two sulfate-impacted lakes on Minnesota’s Mesabi Iron Range.
project name
SAMN09925820
sample derived from
uncultured Mariniplasma sp.
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co309_41
title