2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22357700
SRA accession
SRP179991_co3_110
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
VAMB;3.0.2;default
binning software
aquatic
broad-scale environmental context
2010
collection date
87.25
%
completeness score
CheckM2;1.0.2;default
completeness software
1.17
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR8482193,SRR8482194,SRR8482196 of study SRP179991.
description
aquatic
environmental medium
Arctic Ocean
geographic location (country and/or sea)
73.756333
DD
geographic location (latitude)
8.455167
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
marine sediment metagenome
isolation_source
marine sediment biome
local environmental context
marine sediment metagenome
metagenomic source
uncultured Thermoanaerobaculia bacterium
organism
Metagenome of marine sediment near Loki's castle
project name
SAMN10404973
sample derived from
uncultured Thermoanaerobaculia bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP179991_co3_110
title