2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22453286
SRA accession
SRP098377_co2_2
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
MEGAHIT;1.2.9;default
assembly software
coverage and kmer
binning parameters
VAMB;3.0.2;default
binning software
host
broad-scale environmental context
not provided
collection date
84.0
%
completeness score
CheckM2;1.0.2;default
completeness software
5.32
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR6206331,SRR6206332 of study SRP121091.
description
host
environmental medium
Kenya
geographic location (country and/or sea)
0.2917
DD
geographic location (latitude)
34.856
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
termite gut metagenome
isolation_source
termite gut biome
local environmental context
termite gut metagenome
metagenomic source
uncultured Burkholderiaceae bacterium
organism
Metagenomics of the gut microbiota of higher termites
project name
SAMN07632889
sample derived from
uncultured Burkholderiaceae bacterium
scientific_name
Illumina HiSeq 2000,Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP098377_co2_2
title