2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22442683
SRA accession
SRP041649_co1_47
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
SemiBin2;2.0.2;default
binning software
aquatic
broad-scale environmental context
2012-04-25
collection date
82.14
%
completeness score
CheckM2;1.0.2;default
completeness software
0.54
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR1297186,SRR1297203 of study SRP041649.
description
aquatic
environmental medium
Taiwan
geographic location (country and/or sea)
25.19544
DD
geographic location (latitude)
121.60245
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
hot springs metagenome
isolation_source
hot springs biome
local environmental context
hot springs metagenome
metagenomic source
uncultured Thermoplasmatales archaeon
organism
Metagenomic raw reads from acidic hot spring microbes
project name
SAMN02743532
sample derived from
uncultured Thermoplasmatales archaeon
scientific_name
Illumina HiSeq 2000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP041649_co1_47
title