2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22192445
SRA accession
SRP239054_co1_42
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
engineered
broad-scale environmental context
2018-10-30
collection date
86.08
%
completeness score
CheckM2;1.0.2;default
completeness software
3.3
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR10807626,SRR10807893 of study SRP239054.
description
engineered
environmental medium
China
geographic location (country and/or sea)
31.15
DD
geographic location (latitude)
121.42
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
bioreactor metagenome
isolation_source
bioreactor biome
local environmental context
bioreactor metagenome
metagenomic source
uncultured Thermodesulfobacteriota bacterium
organism
Nitrous oxide (N2O) emission from anammox-based process were extensively reported, but the knowledge about the source of N2O in high-rate anammox granular sludge reactors (AGSR) was limited. In this study, metagenomic combined with activity assay were applied to investigated the contribution to N2O production of anammox granules and flocs in a high-rate AGSR.
project name
SAMN13702287,SAMN13702598
sample derived from
uncultured Thermodesulfobacteriota bacterium
scientific_name
HiSeq X Ten
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP239054_co1_42
title