2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22441850
SRA accession
SRP142039_co1_283
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT;2.15;default
binning software
aquatic
broad-scale environmental context
2016-09-20
collection date
95.84
%
completeness score
CheckM2;1.0.2;default
completeness software
0.15
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR7053533,SRR7053536 of study SRP142058.
description
aquatic
environmental medium
Canada
geographic location (country and/or sea)
49.688
DD
geographic location (latitude)
-93.689
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
lake water metagenome
isolation_source
lake water biome
local environmental context
lake water metagenome
metagenomic source
uncultured Candidatus Saccharibacteria bacterium
organism
Anoxic zone freshwater microbial communities from boreal shield lake in International Institute for Sustainable Development (IISD) Experimental Lakes Area, Ontario, Canada
project name
SAMN08777317,SAMN08779085
sample derived from
uncultured Candidatus Saccharibacteria bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP142039_co1_283
title