2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22356531
SRA accession
SRP144015_co1_11
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
engineered
broad-scale environmental context
2016-07-26
collection date
93.64
%
completeness score
CheckM2;1.0.2;default
completeness software
0.02
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR7082966,SRR7082976 of study SRP144015.
description
engineered
environmental medium
Italy
geographic location (country and/or sea)
45.386549
DD
geographic location (latitude)
11.91084
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
bioreactor metagenome
isolation_source
bioreactor biome
local environmental context
bioreactor metagenome
metagenomic source
uncultured Candidatus Saccharibacteria bacterium
organism
In the present research, six landfill simulation reactors (Ca, Cb, Ia, Ib, Aa, Ab) were filled with municipal solid waste and managed in order to compare an intermittent solution for the aeration of waste with continuous air injection. The experiment was divided in two main phases: landfill simulation (LS) and remediation simulation (RS). The LS phase was made by a pre-aeration, lasted 13 days, and a 53-days long anaerobic period. The RS phase lasted 142 days during which the six columns were managed in three different ways: Ca and Cb were continuously aerated Ia and Ib were intermittently aerated using the same flux Aa and Ab were maintained anaerobic.
project name
SAMN08985419,SAMN08985431
sample derived from
uncultured Candidatus Saccharibacteria bacterium
scientific_name
NextSeq 500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP144015_co1_11
title