2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22193067
SRA accession
SRP260945_co1_445
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
SemiBin2;2.0.2;default
binning software
aquatic
broad-scale environmental context
2007-10-06
collection date
91.19
%
completeness score
CheckM2;1.0.2;default
completeness software
0.03
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR11744915,SRR11744943 of study SRP260945.
description
aquatic
environmental medium
Indian Ocean
geographic location (country and/or sea)
15.15
DD
geographic location (latitude)
64.0
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
seawater metagenome
isolation_source
seawater biome
local environmental context
seawater metagenome
metagenomic source
uncultured bacterium
organism
Seawater microbial communities from, Arabian Sea, Indian Ocean
project name
SAMN14515339,SAMN14515068
sample derived from
uncultured bacterium
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP260945_co1_445
title