2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22451784
SRA accession
binchicken_co364_3
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
terrestrial
broad-scale environmental context
2008-01-01
collection date
69.76
%
completeness score
CheckM2;1.0.2;default
completeness software
2.53
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR4030042,SRR4030043 of study SRP080215.
description
terrestrial
environmental medium
USA
geographic location (country and/or sea)
39.55
DD
geographic location (latitude)
-107.97
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
soil metagenome
isolation_source
soil biome
local environmental context
soil metagenome
metagenomic source
uncultured Eubacteriales bacterium
organism
Soil microbial communities from Rifle, Colorado, USA - 2008 BG 13ft metagenome
project name
SAMN05421554
sample derived from
uncultured Eubacteriales bacterium
scientific_name
Illumina HiSeq 2000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co364_3
title