2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22430849
SRA accession
binchicken_co157_726
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
VAMB;3.0.2;default
binning software
terrestrial
broad-scale environmental context
not provided
collection date
96.33
%
completeness score
CheckM2;1.0.2;default
completeness software
0.0
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR11702770,SRR8925799 of study SRP260218.
description
terrestrial
environmental medium
China
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
bioreactor metagenome
isolation_source
bioreactor biome
local environmental context
bioreactor metagenome
metagenomic source
uncultured Gammaproteobacteria bacterium
organism
To provided a new genomic blueprint of the landfill leachate microbiota
project name
SAMN14824805,SAMN11458181
sample derived from
uncultured Gammaproteobacteria bacterium
scientific_name
Illumina HiSeq 4000,Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co157_726
title