2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22186211
SRA accession
binchicken_co323_13
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
host
broad-scale environmental context
2011-07
collection date
95.37
%
completeness score
CheckM2;1.0.2;default
completeness software
0.04
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR11880811,SRR11880843 of study SRP265342.
description
host
environmental medium
Central African Republic
geographic location (country and/or sea)
6.6111
DD
geographic location (latitude)
20.9394
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
gut metagenome
isolation_source
gut biome
local environmental context
gut metagenome
metagenomic source
uncultured Staphylococcaceae bacterium
organism
Traditional human communities have shown more microbiome similarities with nonhuman primates in comparison to industrialized populations. In this study, we have profiled the fecal metagenomes of BaAka hunter-gatherers and Bantu agriculturalists from Central Africa and compared with the sympatric gorillas across seasons of variable dietary intake to understand this functional convergence.
project name
SAMN15047039,SAMN15047021
sample derived from
uncultured Staphylococcaceae bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co323_13
title