2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22441668
SRA accession
binchicken_co256_893
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
VAMB;3.0.2;default
binning software
aquatic
broad-scale environmental context
not provided
collection date
97.11
%
completeness score
CheckM2;1.0.2;default
completeness software
0.46
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR6479061,SRR7051284 of study SRP130036.
description
aquatic
environmental medium
Mexico
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
hydrothermal vent metagenome
isolation_source
hydrothermal vent biome
local environmental context
hydrothermal vent metagenome
metagenomic source
uncultured bacterium
organism
The sample was collected from very oily and sulfidic sediment, no mat, a little away from M14 mat at a depth of 0-3 cm, 2000m below sea level
project name
SAMN06269079,SAMN08777289
sample derived from
uncultured bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co256_893
title