2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22431735
SRA accession
binchicken_co185_67
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
terrestrial
broad-scale environmental context
2017-06-21
collection date
86.2
%
completeness score
CheckM2;1.0.2;default
completeness software
1.06
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR12313477,SRR12313479 of study SRP273308.
description
terrestrial
environmental medium
Puerto Rico
geographic location (country and/or sea)
18.27
DD
geographic location (latitude)
-65.78
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
rock metagenome
isolation_source
rock biome
local environmental context
rock metagenome
metagenomic source
uncultured Terriglobales bacterium
organism
The study investigates the role of chemolithotrophic and heterotrophic bacteria in the weathering of a granitic outcrop in Puerto Rico.
project name
SAMN15518769,SAMN15518767
sample derived from
uncultured Terriglobales bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co185_67
title