2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22433150
SRA accession
binchicken_co250_469
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
VAMB;3.0.2;default
binning software
engineered
broad-scale environmental context
2017-10-01
collection date
62.83
%
completeness score
CheckM2;1.0.2;default
completeness software
2.31
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR13190158,SRR13203220 of study SRP285564.
description
engineered
environmental medium
China
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
mine drainage metagenome
isolation_source
mine drainage biome
local environmental context
mine drainage metagenome
metagenomic source
Candidatus Micrarchaeota archaeon
organism
Viral and prokaryotic diversity in acid mine drainage sediment
project name
SAMN16988145,SAMN17007425
sample derived from
Candidatus Micrarchaeota archaeon
scientific_name
Illumina MiSeq
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co250_469
title