2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22362575
SRA accession
SRP263527_co2_167
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT;2.15;default
binning software
terrestrial
broad-scale environmental context
2019-10-10
collection date
94.18
%
completeness score
CheckM2;1.0.2;default
completeness software
0.01
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR11843827,SRR11843830 of study SRP263527.
description
terrestrial
environmental medium
China
geographic location (country and/or sea)
40.05
DD
geographic location (latitude)
110.46
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
soil metagenome
isolation_source
soil biome
local environmental context
soil metagenome
metagenomic source
uncultured Candidatus Saccharibacteria bacterium
organism
Soil bacterial community treated by herbicide
project name
SAMN15011678,SAMN15011676
sample derived from
uncultured Candidatus Saccharibacteria bacterium
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP263527_co2_167
title