2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22438966
SRA accession
binchicken_co40_71
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT;2.15;default
binning software
terrestrial
broad-scale environmental context
not provided
collection date
98.25
%
completeness score
CheckM2;1.0.2;default
completeness software
1.02
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs ERR1578618,SRR7473445 of study ERP016812.
description
terrestrial
environmental medium
India
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
soil metagenome
isolation_source
soil biome
local environmental context
soil metagenome
metagenomic source
uncultured Atribacterota bacterium
organism
Soil consist of wide range of microbes that can be applied for various processes. This study aims to do meta-genomics analysis of the given soil sample.
project name
SAMEA4378227,SAMN09580621
sample derived from
uncultured Atribacterota bacterium
scientific_name
Illumina HiSeq 1000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co40_71
title