2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22432029
SRA accession
binchicken_co1_7
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
CONCOCT;1.1.0;default
binning software
aquatic
broad-scale environmental context
2020-06
collection date
99.59
%
completeness score
CheckM2;1.0.2;default
completeness software
0.09
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR14424468,SRR14424469 of study SRP318488.
description
aquatic
environmental medium
Colombia
geographic location (country and/or sea)
3.4959
DD
geographic location (latitude)
-73.4059
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
subsurface metagenome
isolation_source
subsurface biome
local environmental context
subsurface metagenome
metagenomic source
uncultured Desulfovibrio sp.
organism
report of the metagenome found in a hyperthermophile oil well in the Orinoquia region
project name
SAMN19016994
sample derived from
uncultured Desulfovibrio sp.
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co1_7
title