2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22360634
SRA accession
SRP220891_co4_450
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
VAMB;3.0.2;default
binning software
aquatic
broad-scale environmental context
2017-11
collection date
93.69
%
completeness score
CheckM2;1.0.2;default
completeness software
4.13
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR10083292,SRR10083294 of study SRP220891.
description
aquatic
environmental medium
China
geographic location (country and/or sea)
28.22
DD
geographic location (latitude)
115.47
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
wastewater metagenome
isolation_source
wastewater biome
local environmental context
wastewater metagenome
metagenomic source
uncultured Flavobacteriales bacterium
organism
metagenome sequencing
project name
SAMN12696744,SAMN12696742
sample derived from
uncultured Flavobacteriales bacterium
scientific_name
HiSeq X Ten
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP220891_co4_450
title