2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22443986
SRA accession
SRP093185_co1_167
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
SemiBin2;2.0.2;default
binning software
aquatic
broad-scale environmental context
not provided
collection date
74.47
%
completeness score
CheckM2;1.0.2;default
completeness software
2.14
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR5011273,SRR5011275 of study SRP093185.
description
aquatic
environmental medium
South Africa
geographic location (country and/or sea)
-28.232288
DD
geographic location (latitude)
26.79436499
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
subsurface metagenome
isolation_source
subsurface biome
local environmental context
subsurface metagenome
metagenomic source
uncultured Candidatus Babeliaceae bacterium
organism
A temporal study of the microbial communities inhabiting subsurface fracture fluids 1,339 m below land surface in Welkom, South Africa (S 28° 14’ 24” E 26° 47’ 45”). Data contains metagenomic and metatranscriptomic data generated using an Illumina HiSeq 2500 platform.
project name
SAMN04419123,SAMN04419121
sample derived from
uncultured Candidatus Babeliaceae bacterium
scientific_name
Illumina HiSeq 2500,Illumina HiSeq 2000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP093185_co1_167
title