2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22360593
SRA accession
SRP220891_co3_61
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
terrestrial
broad-scale environmental context
2017-09
collection date
74.74
%
completeness score
CheckM2;1.0.2;default
completeness software
4.36
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR10083315,SRR10083318 of study SRP220891.
description
terrestrial
environmental medium
China
geographic location (country and/or sea)
35.38
DD
geographic location (latitude)
100.38
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
soil metagenome
isolation_source
soil biome
local environmental context
soil metagenome
metagenomic source
uncultured Phycisphaera sp.
organism
metagenome sequencing
project name
SAMN12696723,SAMN12696721
sample derived from
uncultured Phycisphaera sp.
scientific_name
HiSeq X Ten
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP220891_co3_61
title