2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22456090
SRA accession
binchicken_co345_20
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
MEGAHIT;1.2.9;default
assembly software
coverage and kmer
binning parameters
SemiBin2;2.0.2;default
binning software
aquatic
broad-scale environmental context
2016-08-11
collection date
66.62
%
completeness score
CheckM2;1.0.2;default
completeness software
0.84
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR7595001,SRR8816671 of study SRP114822.
description
aquatic
environmental medium
Australia
geographic location (country and/or sea)
-33.990771
DD
geographic location (latitude)
151.23245
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
marine metagenome
isolation_source
marine biome
local environmental context
marine metagenome
metagenomic source
uncultured Alteromonas sp.
organism
Marine amplicons from Australian marine (benthic and pelagic environments
project name
SAMN08954292
sample derived from
uncultured Alteromonas sp.
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co345_20
title