2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22441578
SRA accession
binchicken_co235_204
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT;2.15;default
binning software
engineered
broad-scale environmental context
not provided
collection date
86.51
%
completeness score
CheckM2;1.0.2;default
completeness software
2.27
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR10580903,SRR12234142 of study SRP234511.
description
engineered
environmental medium
China
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
activated sludge metagenome
isolation_source
activated sludge biome
local environmental context
activated sludge metagenome
metagenomic source
uncultured Chromatiaceae bacterium
organism
Metagenomic and metatranscriptomic data of anammox reactors samples
project name
SAMN13430372,SAMN15423199
sample derived from
uncultured Chromatiaceae bacterium
scientific_name
Illumina HiSeq 4000,Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co235_204
title