2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22364102
SRA accession
SRP304446_co1_55
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
engineered
broad-scale environmental context
2020-11-13
collection date
86.78
%
completeness score
CheckM2;1.0.2;default
completeness software
1.32
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR13617028,SRR13617032 of study SRP304446.
description
engineered
environmental medium
China
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
sludge metagenome
isolation_source
sludge biome
local environmental context
sludge metagenome
metagenomic source
uncultured Oceanicaulis sp.
organism
The data provided in this study demonstrate the changes in microbial communities and help identify the dominant microflora and genes that play key roles in treating odorous gases.
project name
SAMN17766451,SAMN17766447
sample derived from
uncultured Oceanicaulis sp.
scientific_name
Illumina HiSeq 4000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP304446_co1_55
title