2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22357643
SRA accession
SRP178908_co1_116
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
aquatic
broad-scale environmental context
2014
collection date
60.54
%
completeness score
CheckM2;1.0.2;default
completeness software
1.82
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR8863434,SRR8863435 of study SRP178908.
description
aquatic
environmental medium
USA
geographic location (country and/or sea)
39.6974
DD
geographic location (latitude)
-83.8897
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
groundwater metagenome
isolation_source
groundwater biome
local environmental context
groundwater metagenome
metagenomic source
Candidatus Woesearchaeota archaeon
organism
Ohio groundwater metagenomic samples.
project name
SAMN11321108,SAMN11321104
sample derived from
Candidatus Woesearchaeota archaeon
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP178908_co1_116
title