2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22459266
SRA accession
SRP140028_co1_70
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
MEGAHIT;1.2.9;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
terrestrial
broad-scale environmental context
2017-02-20
collection date
97.95
%
completeness score
CheckM2;1.0.2;default
completeness software
5.5
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR7004200,SRR7004203 of study SRP140031.
description
terrestrial
environmental medium
Colombia
geographic location (country and/or sea)
4.0627
DD
geographic location (latitude)
-73.195
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
peat metagenome
isolation_source
peat biome
local environmental context
peat metagenome
metagenomic source
uncultured Acidobacteriaceae bacterium
organism
Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia
project name
SAMN08776833,SAMN08778645
sample derived from
uncultured Acidobacteriaceae bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP140028_co1_70
title