2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22460528
SRA accession
binchicken_co264_8
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
engineered
broad-scale environmental context
not provided
collection date
65.9
%
completeness score
CheckM2;1.0.2;default
completeness software
2.2
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR10388232,SRR7912025 of study SRP228066.
description
engineered
environmental medium
not applicable
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
drinking water metagenome
isolation_source
drinking water biome
local environmental context
drinking water metagenome
metagenomic source
uncultured Hydrogenophaga sp.
organism
To investigate the impact of disinfection strategy on drinking water microbiome in distribution system
project name
SAMN13183219,SAMN10135947
sample derived from
uncultured Hydrogenophaga sp.
scientific_name
Illumina HiSeq 2500,HiSeq X Ten
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co264_8
title