2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22192433
SRA accession
SRP237667_co1_5
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
host
broad-scale environmental context
2016-08-01
collection date
85.5
%
completeness score
CheckM2;1.0.2;default
completeness software
0.64
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR10694899,SRR10694901 of study SRP237667.
description
host
environmental medium
Australia
geographic location (country and/or sea)
-19.9326
DD
geographic location (latitude)
146.51861
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
macroalgae metagenome
isolation_source
macroalgae biome
local environmental context
macroalgae metagenome
metagenomic source
uncultured Verrucomicrobiales bacterium
organism
Metagenome reads and Metagenome assembled genomes (MAGs) of sponge, macroalgae, and seawater microbiome samples. Samples were collected at Geoffrey Bay, Magnetic Island (Australia).
project name
SAMN13567177,SAMN13567175
sample derived from
uncultured Verrucomicrobiales bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP237667_co1_5
title