2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22451401
SRA accession
binchicken_co322_65
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
engineered
broad-scale environmental context
not provided
collection date
82.82
%
completeness score
CheckM2;1.0.2;default
completeness software
2.32
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR10823750,SRR5933705 of study SRP239405.
description
engineered
environmental medium
not applicable
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
bioreactor metagenome
isolation_source
bioreactor biome
local environmental context
bioreactor metagenome
metagenomic source
uncultured Ferruginibacter sp.
organism
Membrane aerated bioreactor treating synthetic domestic wastewater containing methane, sulfide, and ammonia-nitrogen.
project name
SAMN13701322,SAMN07508036
sample derived from
uncultured Ferruginibacter sp.
scientific_name
Illumina HiSeq 4000,NextSeq 500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co322_65
title