2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22431867
SRA accession
binchicken_co193_10
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
aquatic
broad-scale environmental context
2017-03
collection date
82.66
%
completeness score
CheckM2;1.0.2;default
completeness software
2.0
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR6318356,SRR6318357 of study SRP125524.
description
aquatic
environmental medium
China
geographic location (country and/or sea)
45.3
DD
geographic location (latitude)
116.03
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
subsurface metagenome
isolation_source
subsurface biome
local environmental context
subsurface metagenome
metagenomic source
uncultured bacterium
organism
Metagenomic analysis of microbial community in MEOR-treated oil reservoir
project name
SAMN08043157
sample derived from
uncultured bacterium
scientific_name
Illumina HiSeq 3000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co193_10
title