2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22443072
SRA accession
SRP067234_co1_269
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
MEGAHIT;1.2.9;default
assembly software
coverage and kmer
binning parameters
SemiBin2;2.0.2;default
binning software
aquatic
broad-scale environmental context
2008-07
collection date
84.35
%
completeness score
CheckM2;1.0.2;default
completeness software
1.45
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR2986055,SRR2989655 of study SRP067234.
description
aquatic
environmental medium
Canada
geographic location (country and/or sea)
49.2833
DD
geographic location (latitude)
-119.5833
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
freshwater sediment metagenome
isolation_source
freshwater sediment biome
local environmental context
freshwater sediment metagenome
metagenomic source
uncultured archaeon
organism
Mahoney Lake water and sediment samples
project name
SAMN04330457,SAMN04330458
sample derived from
uncultured archaeon
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP067234_co1_269
title