2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22432195
SRA accession
binchicken_co206_47
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
engineered
broad-scale environmental context
not provided
collection date
61.81
%
completeness score
CheckM2;1.0.2;default
completeness software
2.13
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR3330207,SRR3330212 of study SRP072814.
description
engineered
environmental medium
Singapore
geographic location (country and/or sea)
1.3483
DD
geographic location (latitude)
103.68309999
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
bioreactor sludge metagenome
isolation_source
bioreactor sludge biome
local environmental context
bioreactor sludge metagenome
metagenomic source
uncultured Candidatus Saccharibacteria bacterium
organism
To reveal the transition of structure and function of microbial community in forwards osmosis anaerobic membrane bioreactors
project name
SAMN04604784,SAMN04604785
sample derived from
uncultured Candidatus Saccharibacteria bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co206_47
title