2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22451140
SRA accession
binchicken_co27_458
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
SemiBin2;2.0.2;default
binning software
engineered
broad-scale environmental context
2017-11-10
collection date
95.98
%
completeness score
CheckM2;1.0.2;default
completeness software
1.38
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR9643735,SRR9643738 of study SRP212978.
description
engineered
environmental medium
not provided
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
anaerobic digester metagenome
isolation_source
anaerobic digester biome
local environmental context
anaerobic digester metagenome
metagenomic source
uncultured Coriobacteriaceae bacterium
organism
Enhanced methane production from waste activated sludge using free nitrous acid -potassium ferrate pretreatment and subsequently used for enriching of denitrifying anaerobic methane oxidizing
project name
SAMN12214934,SAMN12214933
sample derived from
uncultured Coriobacteriaceae bacterium
scientific_name
Illumina HiSeq 2000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co27_458
title