2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22364131
SRA accession
SRP304980_co1_288
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
VAMB;3.0.2;default
binning software
terrestrial
broad-scale environmental context
2020-04-10
collection date
73.04
%
completeness score
CheckM2;1.0.2;default
completeness software
0.22
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR13646124,SRR13646125 of study SRP304980.
description
terrestrial
environmental medium
not provided
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
soil metagenome
isolation_source
soil biome
local environmental context
soil metagenome
metagenomic source
uncultured Pseudomonadales bacterium
organism
Spatial distribution of soil microorganism in grassland
project name
SAMN17823431,SAMN17823430
sample derived from
uncultured Pseudomonadales bacterium
scientific_name
Illumina HiSeq 4000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP304980_co1_288
title