2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22453284
SRA accession
SRP098377_co1_54
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT;2.15;default
binning software
host
broad-scale environmental context
2012-11-01
collection date
59.65
%
completeness score
CheckM2;1.0.2;default
completeness software
0.34
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR5247074,SRR5247076 of study SRP099270.
description
host
environmental medium
USA
geographic location (country and/or sea)
26.0625
DD
geographic location (latitude)
-80.2332
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
termite gut metagenome
isolation_source
termite gut biome
local environmental context
termite gut metagenome
metagenomic source
uncultured Thermodesulfobacteriota bacterium
organism
Metagenomics of the gut microbiota of higher termites
project name
SAMN06268464,SAMN06268463
sample derived from
uncultured Thermodesulfobacteriota bacterium
scientific_name
Illumina HiSeq 2000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP098377_co1_54
title