2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22433067
SRA accession
binchicken_co247_6
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
aquatic
broad-scale environmental context
2005-06-14
collection date
64.28
%
completeness score
CheckM2;1.0.2;default
completeness software
0.15
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR1636516,SRR1636517 of study SRP049438.
description
aquatic
environmental medium
New Caledonia
geographic location (country and/or sea)
-22.3609167
DD
geographic location (latitude)
166.8799667
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
aquatic metagenome
isolation_source
aquatic biome
local environmental context
aquatic metagenome
metagenomic source
uncultured Candidatus Saccharibacteria bacterium
organism
Ultramafic rocks in the Earth’s mantle represent a tremendous reservoir of carbon and reducing power. Upon tectonic uplift and exposure to fluid flow, serpentinization of these materials generates copious energy, sustains abiogenic synthesis of organic molecules, and provides opportunities for subsurface microbial communities to interact with deep carbon pools.
project name
SAMN03154341,SAMN03154342
sample derived from
uncultured Candidatus Saccharibacteria bacterium
scientific_name
Illumina HiSeq 1000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co247_6
title