2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22443092
SRA accession
SRP067234_co1_304
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
MEGAHIT;1.2.9;default
assembly software
coverage and kmer
binning parameters
SemiBin2;2.0.2;default
binning software
aquatic
broad-scale environmental context
2008-07
collection date
94.49
%
completeness score
CheckM2;1.0.2;default
completeness software
3.08
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR2986055,SRR2989655 of study SRP067234.
description
aquatic
environmental medium
Canada
geographic location (country and/or sea)
49.2833
DD
geographic location (latitude)
-119.5833
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
freshwater sediment metagenome
isolation_source
freshwater sediment biome
local environmental context
freshwater sediment metagenome
metagenomic source
uncultured Thermoplasmatales archaeon
organism
Mahoney Lake water and sediment samples
project name
SAMN04330457,SAMN04330458
sample derived from
uncultured Thermoplasmatales archaeon
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP067234_co1_304
title