2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22432614
SRA accession
binchicken_co224_209
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
SemiBin2;2.0.2;default
binning software
terrestrial
broad-scale environmental context
not provided
collection date
95.57
%
completeness score
CheckM2;1.0.2;default
completeness software
2.32
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR11829268,SRR8557214 of study SRP262755.
description
terrestrial
environmental medium
USA
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
salt marsh metagenome
isolation_source
salt marsh biome
local environmental context
salt marsh metagenome
metagenomic source
uncultured Desulfobacterales bacterium
organism
Salt marsh sediment microbial communities from Sand Creek Marshes, Rowley, MA, United States
project name
SAMN14511431,SAMN10864106
sample derived from
uncultured Desulfobacterales bacterium
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co224_209
title