2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22390186
SRA accession
SRP260945_co2_420
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
MEGAHIT;1.2.9;default
assembly software
coverage and kmer
binning parameters
SemiBin2;2.0.2;default
binning software
aquatic
broad-scale environmental context
2007-10-06
collection date
99.4
%
completeness score
CheckM2;1.0.2;default
completeness software
1.46
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR11744943,SRR11791037 of study SRP260948.
description
aquatic
environmental medium
Indian Ocean
geographic location (country and/or sea)
15.15
DD
geographic location (latitude)
64.0
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
seawater metagenome
isolation_source
seawater biome
local environmental context
seawater metagenome
metagenomic source
uncultured Rhodospirillaceae bacterium
organism
Seawater microbial communities from, Arabian Sea, Indian Ocean
project name
SAMN14515068,SAMN14515454
sample derived from
uncultured Rhodospirillaceae bacterium
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP260945_co2_420
title