2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22362545
SRA accession
SRP263527_co1_219
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
SemiBin2;2.0.2;default
binning software
terrestrial
broad-scale environmental context
2019-10-10
collection date
75.6
%
completeness score
CheckM2;1.0.2;default
completeness software
0.04
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR11843815,SRR11843817 of study SRP263527.
description
terrestrial
environmental medium
China
geographic location (country and/or sea)
40.05
DD
geographic location (latitude)
110.46
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
soil metagenome
isolation_source
soil biome
local environmental context
soil metagenome
metagenomic source
uncultured Polyangiaceae bacterium
organism
Soil bacterial community treated by herbicide
project name
SAMN15011666,SAMN15011664
sample derived from
uncultured Polyangiaceae bacterium
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP263527_co1_219
title