2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22192398
SRA accession
SRP237561_co1_357
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
SemiBin2;2.0.2;default
binning software
terrestrial
broad-scale environmental context
not provided
collection date
92.94
%
completeness score
CheckM2;1.0.2;default
completeness software
1.4
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR10692897,SRR10692898 of study SRP237561.
description
terrestrial
environmental medium
not provided
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
sand metagenome
isolation_source
sand biome
local environmental context
sand metagenome
metagenomic source
uncultured bacterium
organism
Multidimensional Reveal of Nitrogen Regulation on Comammox
project name
SAMN13563035,SAMN13563034
sample derived from
uncultured bacterium
scientific_name
Illumina MiniSeq
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP237561_co1_357
title