2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22430846
SRA accession
binchicken_co157_711
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
VAMB;3.0.2;default
binning software
terrestrial
broad-scale environmental context
not provided
collection date
91.35
%
completeness score
CheckM2;1.0.2;default
completeness software
1.47
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR11702770,SRR8925799 of study SRP260218.
description
terrestrial
environmental medium
China
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
bioreactor metagenome
isolation_source
bioreactor biome
local environmental context
bioreactor metagenome
metagenomic source
uncultured Oscillospiraceae bacterium
organism
To provided a new genomic blueprint of the landfill leachate microbiota
project name
SAMN14824805,SAMN11458181
sample derived from
uncultured Oscillospiraceae bacterium
scientific_name
Illumina HiSeq 4000,Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co157_711
title