2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22364363
SRA accession
SRP314395_co1_50
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
host
broad-scale environmental context
not provided
collection date
96.77
%
completeness score
CheckM2;1.0.2;default
completeness software
0.09
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR14209493,SRR14209496 of study SRP314395.
description
host
environmental medium
Mexico
geographic location (country and/or sea)
19.08
DD
geographic location (latitude)
-99.2
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
feces metagenome
isolation_source
feces biome
local environmental context
feces metagenome
metagenomic source
uncultured Eubacteriales bacterium
organism
Microbiome and their role in plant fiber and secondary metabolites degradation
project name
SAMN18711230,SAMN18711227
sample derived from
uncultured Eubacteriales bacterium
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP314395_co1_50
title