2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22192413
SRA accession
SRP237561_co1_5
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
terrestrial
broad-scale environmental context
not provided
collection date
89.43
%
completeness score
CheckM2;1.0.2;default
completeness software
1.89
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR10692897,SRR10692898 of study SRP237561.
description
terrestrial
environmental medium
not provided
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
sand metagenome
isolation_source
sand biome
local environmental context
sand metagenome
metagenomic source
uncultured Chitinophagales bacterium
organism
Multidimensional Reveal of Nitrogen Regulation on Comammox
project name
SAMN13563035,SAMN13563034
sample derived from
uncultured Chitinophagales bacterium
scientific_name
Illumina MiniSeq
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP237561_co1_5
title