2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22460394
SRA accession
binchicken_co130_88
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT;2.15;default
binning software
engineered
broad-scale environmental context
2017-11-01
collection date
92.08
%
completeness score
CheckM2;1.0.2;default
completeness software
2.22
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR8109492,SRR8109493 of study SRP166834.
description
engineered
environmental medium
China
geographic location (country and/or sea)
39.26
DD
geographic location (latitude)
117.25
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
bioreactor metagenome
isolation_source
bioreactor biome
local environmental context
bioreactor metagenome
metagenomic source
uncultured Planctomycetales bacterium
organism
Understanding the anammox community structure and active species in the immobilization-anaerobic baffled reactor after the long-term operation.
project name
SAMN10274211,SAMN10274212
sample derived from
uncultured Planctomycetales bacterium
scientific_name
Illumina HiSeq 3000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co130_88
title