2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22460535
SRA accession
binchicken_co265_268
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
SemiBin2;2.0.2;default
binning software
engineered
broad-scale environmental context
2015-05-26
collection date
93.52
%
completeness score
CheckM2;1.0.2;default
completeness software
1.62
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR5007134,SRR5007140 of study SRP093072.
description
engineered
environmental medium
Japan
geographic location (country and/or sea)
34.72
DD
geographic location (latitude)
135.27
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
activated sludge metagenome
isolation_source
activated sludge biome
local environmental context
activated sludge metagenome
metagenomic source
uncultured Nitrososphaerota archaeon
organism
Metagenomics of anaerobic wastewater microbial communities to study anthropogenic carbon cycling
project name
SAMN05720222,SAMN05720156
sample derived from
uncultured Nitrososphaerota archaeon
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co265_268
title