2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22363048
SRA accession
SRP268622_co1_110
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
terrestrial
broad-scale environmental context
not provided
collection date
91.48
%
completeness score
CheckM2;1.0.2;default
completeness software
1.92
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR12081734,SRR12081736 of study SRP268622.
description
terrestrial
environmental medium
China
geographic location (country and/or sea)
30.6
DD
geographic location (latitude)
120.1
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
manure metagenome
isolation_source
manure biome
local environmental context
manure metagenome
metagenomic source
uncultured Candidatus Sumerlaeota bacterium
organism
We applied metagenomic sequencing to investigate the microbial functions during bovine manure composting
project name
SAMN15355926,SAMN15355924
sample derived from
uncultured Candidatus Sumerlaeota bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP268622_co1_110
title