2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22452677
SRA accession
binchicken_co273_17
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
engineered
broad-scale environmental context
2017-04-17
collection date
97.37
%
completeness score
CheckM2;1.0.2;default
completeness software
2.7
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR8476232,SRR8476364 of study SRP181529.
description
engineered
environmental medium
USA
geographic location (country and/or sea)
44.11
DD
geographic location (latitude)
-88.23
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
activated sludge metagenome
isolation_source
activated sludge biome
local environmental context
activated sludge metagenome
metagenomic source
uncultured Elusimicrobiaceae bacterium
organism
Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States
project name
SAMN10351330,SAMN10350934
sample derived from
uncultured Elusimicrobiaceae bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co273_17
title