2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22430976
SRA accession
binchicken_co162_393
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT;2.15;default
binning software
terrestrial
broad-scale environmental context
not provided
collection date
73.41
%
completeness score
CheckM2;1.0.2;default
completeness software
3.96
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR12736056,SRR13781415 of study SRP285691.
description
terrestrial
environmental medium
USA
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
soil metagenome
isolation_source
soil biome
local environmental context
soil metagenome
metagenomic source
uncultured Acidobacteriaceae bacterium
organism
5 peat metagenomes and 5 peat viromes from the Spruce and Peatlands Under Changing Environments (SPRUCE) whole-ecosystem warming experiment and its surrounding bog were analyzed to assess viral diversity, and determine peat viral community compositional patterns after two years of increased temperature treatments.
project name
SAMN16285460,SAMN17675944
sample derived from
uncultured Acidobacteriaceae bacterium
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co162_393
title