2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22460542
SRA accession
binchicken_co274_4
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
aquatic
broad-scale environmental context
not provided
collection date
78.58
%
completeness score
CheckM2;1.0.2;default
completeness software
5.34
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR10095340,SRR12686701 of study SRP221252.
description
aquatic
environmental medium
not applicable
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
hot springs metagenome
isolation_source
hot springs biome
local environmental context
hot springs metagenome
metagenomic source
uncultured bacterium
organism
Raw sequencing reads from thermal pool sediment at Liard River Hot Springs
project name
SAMN12723041,SAMN15739864
sample derived from
uncultured bacterium
scientific_name
NextSeq 550,Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co274_4
title