2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22431331
SRA accession
binchicken_co171_91
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT;2.15;default
binning software
aquatic
broad-scale environmental context
2018-04-23
collection date
57.09
%
completeness score
CheckM2;1.0.2;default
completeness software
0.0
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR8943084,SRR8943089 of study SRP193375.
description
aquatic
environmental medium
Sweden
geographic location (country and/or sea)
57.21366
DD
geographic location (latitude)
19.508972
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
aquatic metagenome
isolation_source
aquatic biome
local environmental context
aquatic metagenome
metagenomic source
uncultured Thermoplasmatales archaeon
organism
DNA and RNA from sediment samples collected in the Eastern Gotland Basin
project name
SAMN11381956
sample derived from
uncultured Thermoplasmatales archaeon
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co171_91
title