2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22192333
SRA accession
SRP231805_co2_69
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
terrestrial
broad-scale environmental context
not provided
collection date
62.58
%
completeness score
CheckM2;1.0.2;default
completeness software
1.16
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR5215464,SRR5215466 of study SRP098467.
description
terrestrial
environmental medium
Indonesia
geographic location (country and/or sea)
-2.75
DD
geographic location (latitude)
121.05
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
sediment metagenome
isolation_source
sediment biome
local environmental context
sediment metagenome
metagenomic source
uncultured Nitrososphaerota archaeon
organism
Sequencing as part of the Microbial Dark Matter project phase II project
project name
SAMN06264842,SAMN06264372
sample derived from
uncultured Nitrososphaerota archaeon
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP231805_co2_69
title