2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22441223
SRA accession
ERP124720_co1_205
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
VAMB;3.0.2;default
binning software
terrestrial
broad-scale environmental context
2014
collection date
98.29
%
completeness score
CheckM2;1.0.2;default
completeness software
3.0
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs ERR4863014,ERR4863017 of study ERP124720.
description
terrestrial
environmental medium
Germany
geographic location (country and/or sea)
51.07
DD
geographic location (latitude)
12.2
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
sediment metagenome
isolation_source
sediment biome
local environmental context
sediment metagenome
metagenomic source
uncultured Chromatiaceae bacterium
organism
A community mineralizing benzene under nitrate-reducing conditions, originally enriched in sand-filled bioreactors percolated with groundwater at a benzene-contaminated aquifer, has been maintained in laboratory microcosms for many years. In this study, we monitored the succession of species in this community during the degradation of benzene under nitrate-reducing conditions.
project name
SAMEA7532622,SAMEA7590565
sample derived from
uncultured Chromatiaceae bacterium
scientific_name
NextSeq 500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: ERP124720_co1_205
title