2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22454960
SRA accession
SRP286056_co1_739
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
VAMB;3.0.2;default
binning software
aquatic
broad-scale environmental context
not provided
collection date
97.55
%
completeness score
CheckM2;1.0.2;default
completeness software
0.49
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR12762303,SRR12762304 of study SRP286056.
description
aquatic
environmental medium
Poland
geographic location (country and/or sea)
53.47
DD
geographic location (latitude)
20.3
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
wastewater metagenome
isolation_source
wastewater biome
local environmental context
wastewater metagenome
metagenomic source
uncultured Bdellovibrionales bacterium
organism
The basic experimental research provided in the project will give new insight into the structure and diversity of antibiotic resistance and mobile elements in two types of wastewater treatment plants.
project name
SAMN16295582,SAMN16295581
sample derived from
uncultured Bdellovibrionales bacterium
scientific_name
Illumina HiSeq 2000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP286056_co1_739
title