2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22441826
SRA accession
binchicken_co28_71
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
aquatic
broad-scale environmental context
not provided
collection date
94.98
%
completeness score
CheckM2;1.0.2;default
completeness software
1.52
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR12939188,SRR8437210 of study SRP289844.
description
aquatic
environmental medium
Canada
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
seawater metagenome
isolation_source
seawater biome
local environmental context
seawater metagenome
metagenomic source
uncultured bacterium
organism
Seawater microbial communities from Saanich Inlet, British Columbia, Canada
project name
SAMN15721645,SAMN10350576
sample derived from
uncultured bacterium
scientific_name
Illumina NovaSeq 6000,Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co28_71
title