2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22453311
SRA accession
SRP104257_co1_234
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
SemiBin2;2.0.2;default
binning software
aquatic
broad-scale environmental context
2008-12-01
collection date
68.8
%
completeness score
CheckM2;1.0.2;default
completeness software
0.26
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR5458845,SRR5581654 of study SRP104295.
description
aquatic
environmental medium
Antarctica
geographic location (country and/or sea)
-68.4725
DD
geographic location (latitude)
78.188
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
salt lake metagenome
isolation_source
salt lake biome
local environmental context
salt lake metagenome
metagenomic source
Candidatus Woesearchaeota archaeon
organism
Seasonal variation in Antarctic microbial communities: ecology, stability and susceptibility to ecosystem change
project name
SAMN06267216,SAMN06343954
sample derived from
Candidatus Woesearchaeota archaeon
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP104257_co1_234
title