2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22432350
SRA accession
binchicken_co20_228
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT;2.15;default
binning software
engineered
broad-scale environmental context
not provided
collection date
100
%
completeness score
CheckM2;1.0.2;default
completeness software
3.92
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR6476076,SRR8476420 of study SRP129834.
description
engineered
environmental medium
USA
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
activated sludge metagenome
isolation_source
activated sludge biome
local environmental context
activated sludge metagenome
metagenomic source
uncultured Spirochaetaceae bacterium
organism
Anaerobic bioreactor packed with granular activated carbon was used to treat synthetic softdrink wastewater at lab scale.
project name
SAMN08367434,SAMN10351103
sample derived from
uncultured Spirochaetaceae bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co20_228
title