2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22390301
SRA accession
binchicken_co76_80
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
aquatic
broad-scale environmental context
not provided
collection date
81.03
%
completeness score
CheckM2;1.0.2;default
completeness software
0.95
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs ERR594300,ERR599114 of study ERP001737.
description
aquatic
environmental medium
not provided
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
marine metagenome
isolation_source
marine biome
local environmental context
marine metagenome
metagenomic source
uncultured Candidatus Poseidoniales archaeon
organism
Seawater was filtered from different depths to retain small cell sizes. The DNA was extracted and submitted to high throughput sequencing.
project name
SAMEA2622843,SAMEA2622817
sample derived from
uncultured Candidatus Poseidoniales archaeon
scientific_name
Illumina HiSeq 2000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co76_80
title