2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22439140
SRA accession
binchicken_co43_371
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
SemiBin2;2.0.2;default
binning software
aquatic
broad-scale environmental context
2018-12-18
collection date
66.19
%
completeness score
CheckM2;1.0.2;default
completeness software
0.91
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR10178537,SRR10178538 of study SRP223183.
description
aquatic
environmental medium
China
geographic location (country and/or sea)
35.04
DD
geographic location (latitude)
113.25
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
wastewater metagenome
isolation_source
wastewater biome
local environmental context
wastewater metagenome
metagenomic source
uncultured Syntrophaceae bacterium
organism
Metagenomic sequencing of wastewater
project name
SAMN12830417,SAMN12830416
sample derived from
uncultured Syntrophaceae bacterium
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co43_371
title