2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22358070
SRA accession
SRP191223_co2_100
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
aquatic
broad-scale environmental context
2014-10-08
collection date
94.02
%
completeness score
CheckM2;1.0.2;default
completeness software
1.27
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR8862234,SRR8862235 of study SRP191233.
description
aquatic
environmental medium
Antarctica
geographic location (country and/or sea)
-68.5958
DD
geographic location (latitude)
78.1913
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
marine metagenome
isolation_source
marine biome
local environmental context
marine metagenome
metagenomic source
uncultured bacterium
organism
Marine microbial communities from Ellis Fjord, Antarctic Ocean
project name
SAMN10864118,SAMN10864394
sample derived from
uncultured bacterium
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP191223_co2_100
title