2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22458696
SRA accession
SRP089250_co1_214
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
engineered
broad-scale environmental context
2015-05-17
collection date
97.99
%
completeness score
CheckM2;1.0.2;default
completeness software
2.71
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR4236661,SRR5007244 of study SRP089263.
description
engineered
environmental medium
Japan
geographic location (country and/or sea)
35.92
DD
geographic location (latitude)
139.63
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
activated sludge metagenome
isolation_source
activated sludge biome
local environmental context
activated sludge metagenome
metagenomic source
uncultured Candidatus Solibacter sp.
organism
Metagenomics of anaerobic wastewater microbial communities to study anthropogenic carbon cycling
project name
SAMN05720203,SAMN05720165
sample derived from
uncultured Candidatus Solibacter sp.
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP089250_co1_214
title