2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22457766
SRA accession
SRP126598_co1_32
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
aquatic
broad-scale environmental context
2012-11-19
collection date
96.84
%
completeness score
CheckM2;1.0.2;default
completeness software
0.37
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR6370753,SRR6370757 of study SRP126598.
description
aquatic
environmental medium
Atlantic Ocean
geographic location (country and/or sea)
-44.0
DD
geographic location (latitude)
-50.0
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
aquatic metagenome
isolation_source
aquatic biome
local environmental context
aquatic metagenome
metagenomic source
uncultured Chitinophagales bacterium
organism
Study the diversity and potential function of marine aggregates-associated microbial communities. Samples were from Atlantic Ocean.
project name
SAMN08156241
sample derived from
uncultured Chitinophagales bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP126598_co1_32
title