2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22459115
SRA accession
binchicken_co74_409
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
VAMB;3.0.2;default
binning software
aquatic
broad-scale environmental context
2021-09-01
collection date
94.78
%
completeness score
CheckM2;1.0.2;default
completeness software
1.72
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR15734599,SRR15734600,SRR15734604 of study SRP335941.
description
aquatic
environmental medium
Singapore
geographic location (country and/or sea)
1.35
DD
geographic location (latitude)
103.82
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
marine metagenome
isolation_source
marine biome
local environmental context
marine metagenome
metagenomic source
uncultured Thermodesulfobacteriota bacterium
organism
Assessment of the metagenomic bins assembled for waste water
project name
SAMN21246661,SAMN21246660,SAMN21246656
sample derived from
uncultured Thermodesulfobacteriota bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co74_409
title