2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22457738
SRA accession
SRP124364_co1_304
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT;2.15;default
binning software
aquatic
broad-scale environmental context
2014-10-31
collection date
95.56
%
completeness score
CheckM2;1.0.2;default
completeness software
1.12
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR6262237,SRR6262238 of study SRP124364.
description
aquatic
environmental medium
China
geographic location (country and/or sea)
24.82
DD
geographic location (latitude)
118.16
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
freshwater metagenome
isolation_source
freshwater biome
local environmental context
freshwater metagenome
metagenomic source
uncultured bacterium
organism
Metagenome data from freshwater of Xidong Reservoir
project name
SAMN07961457,SAMN07961456
sample derived from
uncultured bacterium
scientific_name
Illumina HiSeq 4000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP124364_co1_304
title