2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22458610
SRA accession
binchicken_co21_294
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
aquatic
broad-scale environmental context
2014-12-14
collection date
87.8
%
completeness score
CheckM2;1.0.2;default
completeness software
0.71
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR5747841,SRR5747861 of study SRP110210.
description
aquatic
environmental medium
USA
geographic location (country and/or sea)
36.96
DD
geographic location (latitude)
-116.72
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
hot springs metagenome
isolation_source
hot springs biome
local environmental context
hot springs metagenome
metagenomic source
uncultured Candidatus Saccharibacteria bacterium
organism
Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2
project name
SAMN06267239,SAMN06267240
sample derived from
uncultured Candidatus Saccharibacteria bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co21_294
title