2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22451925
SRA accession
binchicken_co6_236
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
aquatic
broad-scale environmental context
2016-12-24
collection date
96.14
%
completeness score
CheckM2;1.0.2;default
completeness software
0.0
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR7051295,SRR7051320 of study SRP141654.
description
aquatic
environmental medium
Mexico
geographic location (country and/or sea)
27.0114
DD
geographic location (latitude)
-110.5956
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
hydrothermal vent metagenome
isolation_source
hydrothermal vent biome
local environmental context
hydrothermal vent metagenome
metagenomic source
uncultured Candidatus Saccharibacteria bacterium
organism
Chains of large sulfur bacteria (LSB) and adherent epibionts from hydrothermal sulfide chimneys and mounds microbial mats in Southern Trench, Guaymas Basin
project name
SAMN08777288,SAMN08779106
sample derived from
uncultured Candidatus Saccharibacteria bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co6_236
title