2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22459138
SRA accession
binchicken_co357_137
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
SemiBin2;2.0.2;default
binning software
aquatic
broad-scale environmental context
not provided
collection date
90.87
%
completeness score
CheckM2;1.0.2;default
completeness software
0.08
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR5214303,SRR7051057 of study SRP098344.
description
aquatic
environmental medium
Mexico
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
hydrothermal vent metagenome
isolation_source
hydrothermal vent biome
local environmental context
hydrothermal vent metagenome
metagenomic source
uncultured Desulfobacteraceae bacterium
organism
Microbial Dark Matter project phase II - Metagenome sequencing of marine hydrothermal vent microbial communities
project name
SAMN06266163,SAMN08779077
sample derived from
uncultured Desulfobacteraceae bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co357_137
title