2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22456098
SRA accession
SRP114822_co2_56
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT;2.15;default
binning software
aquatic
broad-scale environmental context
2017-04-05
collection date
71.5
%
completeness score
CheckM2;1.0.2;default
completeness software
0.57
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR7595314,SRR8818201 of study SRP114822.
description
aquatic
environmental medium
Australia
geographic location (country and/or sea)
-33.847209
DD
geographic location (latitude)
151.198361
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
marine metagenome
isolation_source
marine biome
local environmental context
marine metagenome
metagenomic source
uncultured Algimonas sp.
organism
Marine amplicons from Australian marine (benthic and pelagic environments
project name
SAMN08954251
sample derived from
uncultured Algimonas sp.
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP114822_co2_56
title