2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22460705
SRA accession
binchicken_co279_226
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
MEGAHIT;1.2.9;default
assembly software
coverage and kmer
binning parameters
SemiBin2;2.0.2;default
binning software
aquatic
broad-scale environmental context
2016-08-11
collection date
63.8
%
completeness score
CheckM2;1.0.2;default
completeness software
0.69
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR11837712,SRR11837737 of study SRP263193.
description
aquatic
environmental medium
USA
geographic location (country and/or sea)
35.8959
DD
geographic location (latitude)
-76.1658
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
wetland metagenome
isolation_source
wetland biome
local environmental context
wetland metagenome
metagenomic source
uncultured Acidobacteriaceae bacterium
organism
Soil microbial communities from coastal freshwater wetland in North Carolina, United States dry history, dry treatment
project name
SAMN14512291,SAMN14513301
sample derived from
uncultured Acidobacteriaceae bacterium
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co279_226
title