2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22455319
SRA accession
SRP318679_co1_87
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
aquatic
broad-scale environmental context
2019-07-09
collection date
87.39
%
completeness score
CheckM2;1.0.2;default
completeness software
0.59
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR14454014,SRR14454018 of study SRP318679.
description
aquatic
environmental medium
China
geographic location (country and/or sea)
40.0
DD
geographic location (latitude)
116.39
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
aquatic metagenome
isolation_source
aquatic biome
local environmental context
aquatic metagenome
metagenomic source
uncultured Brevundimonas sp.
organism
metagenome of samples from the Dragon Shaped Water System
project name
SAMN18896317,SAMN18896313
sample derived from
uncultured Brevundimonas sp.
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP318679_co1_87
title