2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22450869
SRA accession
binchicken_co154_195
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
aquatic
broad-scale environmental context
2017-12
collection date
95.47
%
completeness score
CheckM2;1.0.2;default
completeness software
0.12
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR12447077,SRR12447078,SRR12447083,SRR12447100 of study SRP277370.
description
aquatic
environmental medium
China
geographic location (country and/or sea)
23.0
DD
geographic location (latitude)
116.0
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
wastewater metagenome
isolation_source
wastewater biome
local environmental context
wastewater metagenome
metagenomic source
uncultured Planctomycetales bacterium
organism
Metagenomic Insights Into the relationship between bacterial and Phages to Antibiotic Resistance in Swine Feedlot Wastewater Treatment
project name
SAMN15805254,SAMN15805253,SAMN15805248,SAMN15805259
sample derived from
uncultured Planctomycetales bacterium
scientific_name
HiSeq X Ten
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co154_195
title