2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22455210
SRA accession
binchicken_co257_8
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
terrestrial
broad-scale environmental context
2011-07-21
collection date
100
%
completeness score
CheckM2;1.0.2;default
completeness software
7.0
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR943312,SRR943313 of study SRP017582.
description
terrestrial
environmental medium
Canada
geographic location (country and/or sea)
57.057175
DD
geographic location (latitude)
-111.599946
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
hydrocarbon metagenome
isolation_source
hydrocarbon biome
local environmental context
hydrocarbon metagenome
metagenomic source
uncultured Candidatus Sumerlaeota bacterium
organism
Develop a database to describe and harness the genetic potential of the microorganisms, genes and biological processes that exist naturally in microbial communities in our oil sands and coal beds. By identifying the genes, bioprocesses and bacteria in the old sands and coal beds, we will improve our understanding of how methane in hydrocarbon resources is generated and identify the enzymes involved in the natural cracking of hydrocarbons that produce methane and carbon dioxide.
project name
SAMN01828451
sample derived from
uncultured Candidatus Sumerlaeota bacterium
scientific_name
Illumina HiSeq 2000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co257_8
title