2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22455306
SRA accession
SRP133034_co1_74
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
engineered
broad-scale environmental context
2016-05-07
collection date
92.59
%
completeness score
CheckM2;1.0.2;default
completeness software
4.08
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR6747781,SRR6747782 of study SRP133034.
description
engineered
environmental medium
Hong Kong
geographic location (country and/or sea)
22.511132
DD
geographic location (latitude)
114.118591
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
activated sludge metagenome
isolation_source
activated sludge biome
local environmental context
activated sludge metagenome
metagenomic source
uncultured Candidatus Saccharibacteria bacterium
organism
Actiavted sludge samples collected from Shatin WWTP, Hong Kong
project name
SAMN08389278,SAMN08389277
sample derived from
uncultured Candidatus Saccharibacteria bacterium
scientific_name
Illumina HiSeq 4000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP133034_co1_74
title