2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22451724
SRA accession
binchicken_co351_92
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
VAMB;3.0.2;default
binning software
engineered
broad-scale environmental context
not provided
collection date
100
%
completeness score
CheckM2;1.0.2;default
completeness software
0.09
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs ERR1233629,SRR5933703 of study ERP014095.
description
engineered
environmental medium
Australia
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
wastewater metagenome
isolation_source
wastewater biome
local environmental context
wastewater metagenome
metagenomic source
uncultured Ohtaekwangia sp.
organism
Nitrifying reactor with FNA treatment and varying concentrations
project name
SAMEA3861848,SAMN07508034
sample derived from
uncultured Ohtaekwangia sp.
scientific_name
Illumina HiSeq 2000,NextSeq 500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co351_92
title