2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22450949
SRA accession
binchicken_co266_254
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
VAMB;3.0.2;default
binning software
aquatic
broad-scale environmental context
not provided
collection date
100
%
completeness score
CheckM2;1.0.2;default
completeness software
4.66
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR8863431,SRR8863436,SRR8863440 of study SRP178908.
description
aquatic
environmental medium
USA
geographic location (country and/or sea)
39.303
DD
geographic location (latitude)
-82.1278
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
groundwater metagenome
isolation_source
groundwater biome
local environmental context
groundwater metagenome
metagenomic source
uncultured Desulfatibacillum sp.
organism
Ohio groundwater metagenomic samples.
project name
SAMN11321109,SAMN11321106,SAMN11321105
sample derived from
uncultured Desulfatibacillum sp.
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co266_254
title