2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22453451
SRA accession
SRP163575_co2_163
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT;2.15;default
binning software
aquatic
broad-scale environmental context
2008-07-25
collection date
77.72
%
completeness score
CheckM2;1.0.2;default
completeness software
2.35
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR7968113 of study SRP163580.
description
aquatic
environmental medium
Atlantic Ocean
geographic location (country and/or sea)
37.29040000
DD
geographic location (latitude)
-32.27650000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
hydrothermal vent metagenome
isolation_source
hydrothermal vent biome
local environmental context
hydrothermal vent metagenome
metagenomic source
uncultured Campylobacterales bacterium
organism
Hydrothermal vent microbial communities from Mid Atlantic Ridge, Atlantic Ocean
project name
SAMN09093794
sample derived from
uncultured Campylobacterales bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP163575_co2_163
title