2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22449898
SRA accession
SRP338002_co1_28
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
terrestrial
broad-scale environmental context
2017-11-02
collection date
72.63
%
completeness score
CheckM2;1.0.2;default
completeness software
3.42
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR15988951,SRR15988952 of study SRP338002.
description
terrestrial
environmental medium
Mexico
geographic location (country and/or sea)
23.954027
DD
geographic location (latitude)
-108.863325
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
rock metagenome
isolation_source
rock biome
local environmental context
rock metagenome
metagenomic source
uncultured Sulfurovum sp.
organism
Complete genomes and Metagenome-assembled genomes (MAGs) of bacteria and archaea from Pescadero Basin
project name
SAMN21379715
sample derived from
uncultured Sulfurovum sp.
scientific_name
Illumina HiSeq 4000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRP338002_co1_28
title