2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22460668
SRA accession
binchicken_co276_45
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
engineered
broad-scale environmental context
not provided
collection date
80.81
%
completeness score
CheckM2;1.0.2;default
completeness software
3.23
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs ERR3494953,ERR3494955,ERR3494959 of study ERP116156.
description
engineered
environmental medium
United Arab Emirates
geographic location (country and/or sea)
24.413991
DD
geographic location (latitude)
54.568687
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
biofilm metagenome
isolation_source
biofilm biome
local environmental context
biofilm metagenome
metagenomic source
uncultured Opitutaceae bacterium
organism
Metagenomic datasets for biofouling biofilm samples collected from the water cooling tower basins of two district cooling plants.
project name
SAMEA5885958,SAMEA5885960,SAMEA5885964
sample derived from
uncultured Opitutaceae bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co276_45
title