2024-12-11
ENA first public
ERC000047
ENA-CHECKLIST
CMR
INSDC center name
public
INSDC status
ERS22452380
SRA accession
binchicken_co92_6
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.4;default
assembly software
coverage and kmer
binning parameters
MetaBAT2;2.15;default
binning software
aquatic
broad-scale environmental context
not provided
collection date
57.2
%
completeness score
CheckM2;1.0.2;default
completeness software
0.6
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR7004989,SRR7005032 of study SRP140130.
description
aquatic
environmental medium
USA
geographic location (country and/or sea)
30.238
DD
geographic location (latitude)
-102.628
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
subsurface metagenome
isolation_source
subsurface biome
local environmental context
subsurface metagenome
metagenomic source
uncultured Candidatus Peribacteria bacterium
organism
Subsurface microbial communities from deep shales in Texas, USA
project name
SAMN08778348,SAMN08778349
sample derived from
uncultured Candidatus Peribacteria bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: binchicken_co92_6
title