SAMN00000008
External Id
Washington University, Genome Sequencing Center
INSDC center name
2008-04-04T00:00:00Z
INSDC first public
2024-04-07T02:00:02.101Z
INSDC last update
SRS000008
INSDC secondary accession
live
INSDC status
MIGS.ba
NCBI submission model
MIGS.ba.6.0
NCBI submission package
SRS000008
SRA accession
PCAP
assembly
terrestrial biome [ENVO:00000446]
biome
not determined
collection date
Dorea formicigenerans (GenBank Accession Number for 16S rRNA gene: L34619) is a member of the Firmicutes division of the domain bacteria. In one comprehensive 16S rDNA sequence- based enumeration of the colonic microbiota of three healthy adult humans, it represents, on average, 0.617% of all 16S rDNA sequences and 1.215% of the sequences in its division (Eckburg et. al. (2005)).
description
3186000
estimated size
human-associated habitat [ENVO:00009003]
feature
Level 3: Improved-High-Quality Draft7.5x;16
finishing strategy (depth of coverage)
not determined
geo loc name
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
host
9606
host taxid
not determined
isol_growth_condt
not determined
lat lon
biological product [ENVO:02000043]
material
not determined
misc_param: HMP body site
gastrointestinal_tract
misc_param: HMP supersite
not determined
nucleic acid extraction
not determined
num_replicons
Dorea formicigenerans ATCC 27755
http://purl.obolibrary.org/obo/NCBITaxon_411461
organism
Dorea formicigenerans ATCC 27755
project name
Reference Genome
project_type
not determined
ref_biomaterial
454, Sanger
sequencing method
http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
sop
ATCC 27755
source_mat_id
ATCC 27755
strain
MIGS Cultured Bacterial/Archaeal sample from Dorea formicigenerans ATCC 27755
title
type strain of Eubacterium formicigenerans
type-material