SAMN34048789
External Id
Third Institute of Oceanography, Ministry of Natural Resources
INSDC center name
2023-07-22T00:00:00Z
INSDC first public
2024-12-13T21:06:23.535Z
INSDC last update
live
INSDC status
MIMAG.sediment
NCBI submission model
MIMAG.sediment.6.0
NCBI submission package
ERS22579942
SRA accession
not applicable
alkalinity
not applicable
alkyl_diethers
not applicable
altitude
not applicable
aminopept_act
not applicable
ammonium
not applicable
bacteria_carb_prod
not applicable
biomass
not applicable
bishomohopanol
not applicable
bromide
not applicable
calcium
not applicable
carb_nitro_ratio
not applicable
chem_administration
not applicable
chloride
not applicable
chlorophyll
not applicable
collection_date
not applicable
collection_method
not applicable
density
not applicable
depth
This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR7716469, SRR7716470, SRR7716471, SRR5716301, SRR5716302, SRR5716303, SRR5716304, SRR5716305, SRR5716306, SRR5716307, SRR5716308, SRR5716309, SRR5716310, SRR5716311, SRR5716312, SRR5716313, SRR5716314, SRR14270297, SRR14339846, SRR14339845, SRR14339844, SRR18920794, SRR18920793, SRR18920792, SRR18920791, SRR18920790, SRR18936880, SRR18936879, SRR18936878, SRR18936877, SRR18936876, SRR18936875, SRR18936874, SRR18936873, SRR18936872, SRR18936871, SRR1971625, SRR1971624, SRR1971622, SRR1971621, SRR1971620, SRR1971619, SRR11306553, SRR11306552, SRR11306551, SRR11306550, SRR11306549, SRR11306548, SRR11306547, SRR11306544, SRR11306543, SRR11306542, SRR11306567, SRR11306566, SRR19020589, SRR19020588, SRR19020587, SRR19020586, SRR19020585, SRR19020584, SRR19020600, SRR19020599, SRR19020591, SRR19020590, SRR22839552, SRR22839553, SRR9649755, SRR9649756, SRR9649758, SRR9649759, SRR9649760, SRR11306565, SRR11306564, SRR11306563, SRR11306562, SRR11306561, SRR11306559, SRR11306558, SRR11306557, SRR11306556, SRR11306555, SRR11306554, ERR3365594, ERR3365595, ERR3341267, ERR3341266, ERR3341265, ERR3341264, ERR3341263, SRR14923481, SRR14923482, SRR14923483, SRR14923484, SRR14923491, SRR14923492, SRR14923490, SRR14923477, SRR14923478, SRR14923479, SRR14923480, SRR14872661, SRR14872660, SRR14872670, SRR14872669, SRR14872668
derived-from
not applicable
description
not applicable
diether_lipids
not applicable
diss_carb_dioxide
not applicable
diss_hydrogen
not applicable
diss_inorg_carb
not applicable
diss_org_carb
not applicable
diss_org_nitro
not applicable
diss_oxygen
not applicable
elev
not applicable
env_broad_scale
not applicable
env_local_scale
not applicable
env_medium
1
environmental-sample
not applicable
experimental_factor
not applicable
geo_loc_name
not applicable
glucosidase_act
CSMAG_1086
isolate
cold seep
isolation_source
not applicable
lat_lon
not applicable
magnesium
not applicable
mean_frict_vel
not applicable
mean_peak_frict_vel
cold seep metagenome
metagenome-source
1
metagenomic
not applicable
methane
not applicable
misc_param
not applicable
n_alkanes
not applicable
neg_cont_type
not applicable
nitrate
not applicable
nitrite
not applicable
nitro
not applicable
omics_observ_id
not applicable
org_carb
not applicable
org_matter
not applicable
org_nitro
Candidatus Methanophagales archaeon
http://purl.obolibrary.org/obo/NCBITaxon_2056316
organism
not applicable
organism_count
not applicable
oxy_stat_samp
not applicable
part_org_carb
not applicable
particle_class
not applicable
perturbation
not applicable
petroleum_hydrocarb
not applicable
ph
not applicable
phaeopigments
not applicable
phosphate
not applicable
phosplipid_fatt_acid
not applicable
porosity
not applicable
pos_cont_type
not applicable
potassium
not applicable
pressure
not applicable
redox_potential
not applicable
ref_biomaterial
not applicable
rel_to_oxygen
biological replicate 1086
replicate
not applicable
salinity
not applicable
samp_collect_device
not applicable
samp_mat_process
not applicable
samp_size
not applicable
samp_store_dur
not applicable
samp_store_loc
not applicable
samp_store_temp
not applicable
samp_vol_we_dna_ext
metagenomic assembly
sample-type
not applicable
sediment_type
not applicable
silicate
not applicable
size_frac
not applicable
sodium
not applicable
source_material_id
not applicable
sulfate
not applicable
sulfide
not applicable
temp
not applicable
tidal_stage
MIMAG Metagenome-assembled Genome sample from Candidatus Methanophagales archaeon
title
not applicable
tot_carb
not applicable
tot_depth_water_col
not applicable
tot_nitro
not applicable
tot_org_carb
not applicable
turbidity
not applicable
water_content