SAMD00020953
External Id
Okinawa Institute of Science and Technology Marine Genomics Unit
INSDC center name
2018-06-02T00:00:00Z
INSDC first public
2024-06-02T01:49:41.463Z
INSDC last update
DRS063423
INSDC secondary accession
live
INSDC status
MIGS.eu
NCBI submission model
MIGS.eu.6.0
NCBI submission package
DRS063423
SRA accession
not clear
collection date
A cultured dinoflagellate, Symbiodinium sp. clade C (strain name, Y103) was selected for whole genome sequencing. The Symbiodinium sp. was harbored by the cardiid clam, Fragum sp. in Okinawa, Japan. The isolation of the Symbiodinium cells was performed by Prof. Terufumi Yamasu, at University of the Ryukyus. The cultured Symbiodinium sp. has been maintained successfully in the laboratory of Prof. Michio Hidaka, at University of the Ryukyus and was named as the strain Y103. By manually isolating single cells under microscope using a glass micropipette, Y103 isoclonal lines were established in the Satoh laboratory at Okinawa Institute of Science and technology Graduate University.
description
coral reef
http://purl.obolibrary.org/obo/ENVO_00000150
env_broad_scale
body of Fragum sp.
env_local_scale
sea water
http://purl.obolibrary.org/obo/CHEBI_15377
env_medium
2,700 Mb
estimated size
Japan: Okinawa, ocean
geo loc name
Fragum sp.
host
80820
host_spec_range
PMID: 23850284
isol_growth_condt
not clear
lat lon
not clear
num_replicons
Symbiodinium sp. clade C Y103
http://purl.obolibrary.org/obo/NCBITaxon_1563116
organism
1
ploidy
Draft genome of Symbiodinium sp. Clade C Y103
project name
non-related
http://www.ebi.ac.uk/efo/EFO_0005432
propagation
symC-Y103-2014
sample name
Y103
strain
Symbiodinium sp. symC-Y103-2014
title