SAMN09926425
External Id
The University of Hong Kong
INSDC center name
2019-09-30T00:00:00Z
INSDC first public
2024-01-17T21:08:10.677Z
INSDC last update
SRS3745357
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS3745357
SRA accession
MEGAHIT v1.1.2
assembly_method_and_version
2009-05-25
collection date
57.17
completeness_estimated
9.34
contamination_estimated
This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR1217460 SRR1217463 SRR1217565
derived-from
true
environmental sample
15.63
genome coverage
Pacific Ocean:Lau Basin
geo loc name
SZUA-1301
isolate
Abe hydrothermal plume 200m
isolation source
20.76121471 S 176.19057363 W
lat lon
Bowtie 2 v2.2.8
mapping_method_and_version
hydrothermal vent metagenome
metagenome source
true
metagenomic
Candidatus Neomarinimicrobiota bacterium
http://purl.obolibrary.org/obo/NCBITaxon_2026760
organism
CheckM v1.0.7
quality_assessment_method_and_version
metagenomic assembly
sample type
Microbe sample from Candidatus Neomarinimicrobiota bacterium
title