SAMN12129103
External Id
Fisheries and Oceans Canada
INSDC center name
2019-06-24T00:00:00Z
INSDC first public
2024-05-06T21:10:00.354Z
INSDC last update
SRS5020780
INSDC secondary accession
live
INSDC status
Model organism or animal
NCBI submission model
Model.organism.animal.1.0
NCBI submission package
SRS5020780
SRA accession
mix
http://purl.obolibrary.org/obo/NCIT_C64925
age
see associated manuscript
collected by
Multiplexed mix of Pacific oyster
description
barcode_and_cutsite: SER_1293 barcode: CTAAGGTAACGAT ; SER_1274 barcode: TTCGTGATTCGAT ; SER_1331 barcode: TCTAACGGACGAT ; SER_1334 barcode: TTAGTCGGACGAT ; HIS_1002 barcode: CCTGAGATACGAT ; SER_1337 barcode: TCCAAGCTGCGAT ; HIS_1246 barcode: CTTGAGAATGTCGAT ; SER_1263 barcode: CTTGACACCGCGAT ; SER_1338 barcode: TAAGGAGAACGAT ; HIS_978 barcode: TTCCGATAACGAT ; SER_1323 barcode: TTGGAGTGTCGAT ; HIS_1229 barcode: CAGATCCATCGAT ; SER_1335 barcode: TTACAACCTCGAT ; HIS_990 barcode: TCTTACACACGAT ; HIS_983 barcode: TGGAGGACGGACGAT ; SER_1264 barcode: TTGGAGGCCAGCGAT ; SER_1280 barcode: AAGAGGATTCGAT ; SER_1281 barcode: TGAGCGGAACGAT ; HIS_1224 barcode: TCTAGAGGTCGAT ; HIS_1020 barcode: TCGCAATTACGAT ; SER_1296 barcode: AACCATCCGCGAT ; HIS_1015 barcode: TTCTCATTGAACGAT ; HIS_1211 barcode: TAACAATCGGCGAT ; SER_1343 barcode: TGGAGCTTCCTCGAT ; HIS_1005 barcode: TACCAAGATCGAT ; HIS_1223 barcode: CTGACCGAACGAT ; HIS_1017 barcode: TCTGGATGACGAT ; SER_1330 barcode: TTCGAGACGCGAT ; HIS_992 barcode: ATCCGGAATCGAT ; HIS_1222 barcode: TCGCATCGTTCGAT ; SER_1340 barcode: CTGACATAATCGAT ; SER_1316 barcode: TCAGTCCGAACGAT ; HIS_1016 barcode: CAGAAGGAACGAT ; SER_1289 barcode: TCCTCGAATCGAT ; HIS_1227 barcode: TCTATTCGTCGAT ; HIS_1004 barcode: TGCCACGAACGAT ; HIS_1242 barcode: TCGACCACTCGAT ; HIS_1239 barcode: TAAGCCATTGTCGAT ; SER_1291 barcode: TAAGGCAACCACGAT ; HIS_1230 barcode: CTGCAAGTTCGAT ; SER_1288 barcode: TAGGTGGTTCGAT ; SER_1271 barcode: AGGCAATTGCGAT ; SER_1310 barcode: AACCTCATTCGAT ; HIS_979 barcode: CGAGGTTATCGAT ; SER_1275 barcode: AAGGAATCGTCGAT ; HIS_1248 barcode: AGCACGAATCGAT ; SER_1347 barcode: TTCTAAGAGACGAT
design description
adult
http://www.ebi.ac.uk/efo/EFO_0001272
dev stage
mop_p3402c01.fastq.gz
filename
mop_p3402_c02.fastq.gz
filename2
Ion Torrent Proton
instrument model
mop_p3402
library id
single
library layout
Reduced Representation
library selection
GENOMIC
http://www.ebi.ac.uk/efo/EFO_0008479
library source
RAD-Seq
library strategy
Magallana gigas
http://purl.obolibrary.org/obo/NCBITaxon_29159
organism
ION_TORRENT
platform
mix
http://purl.obolibrary.org/obo/NCIT_C64925
strain
mantle
http://purl.obolibrary.org/obo/CL_0000236
tissue
GBS (pool) of Cgigas mantle
title
pool_of_indiv
title