SAMN13192998
External Id
The University of Queensland
INSDC center name
2020-03-02T00:00:00Z
INSDC first public
2024-03-22T21:07:54.423Z
INSDC last update
SRS5771393
INSDC secondary accession
live
INSDC status
MIMAG
NCBI submission model
MIMAG.6.0
NCBI submission package
SRS5771393
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
not available
http://www.ebi.ac.uk/efo/EFO_0001071
collection date
0.6129
completeness_estimated
0.0086
contamination_estimated
This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: ERR599148
derived-from
Uncultivated genome recovered from an assembly of the ERX555959 metagenome.
description
deep chlorophyll maximum layer
env_broad_scale
not available
http://www.ebi.ac.uk/efo/EFO_0001071
env_local_scale
not available
http://www.ebi.ac.uk/efo/EFO_0001071
env_medium
True
environmental sample
not available
http://www.ebi.ac.uk/efo/EFO_0001071
geo loc name
UBA12210
isolate
marine
isolation source
not available
http://www.ebi.ac.uk/efo/EFO_0001071
lat lon
0.7.12-r1039
mapping_method
BWA (BWA-MEM)
mapping_method_version
marine metagenome
metagenome source
True
metagenomic
Candidatus Thalassarchaeum sp.
http://purl.obolibrary.org/obo/NCBITaxon_3134679
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
U_77038
title