SAMN12129113
External Id
Fisheries and Oceans Canada
INSDC center name
2019-06-24T00:00:00Z
INSDC first public
2024-05-06T21:10:00.553Z
INSDC last update
SRS5020788
INSDC secondary accession
live
INSDC status
Model organism or animal
NCBI submission model
Model.organism.animal.1.0
NCBI submission package
SRS5020788
SRA accession
mix
http://purl.obolibrary.org/obo/NCIT_C64925
age
Multiplexed mix of Pacific oyster
description
barcode_and_cutsite: PEN_777 barcode: TACCAAGATCGAT; PEN_778 barcode: CTGACCGAACGAT; PEN_796 barcode: TCTGGATGACGAT; PEN_800 barcode: TTCGAGACGCGAT; PEN_806 barcode: ATCCGGAATCGAT; PEN_810 barcode: TCGCATCGTTCGAT; PEN_815 barcode: CTGACATAATCGAT; HIS_977 barcode: TCAGTCCGAACGAT; HIS_982 barcode: CAGAAGGAACGAT; HIS_984 barcode: TCCTCGAATCGAT; HIS_986 barcode: TCTATTCGTCGAT; HIS_987 barcode: TGCCACGAACGAT; HIS_988 barcode: TCGACCACTCGAT; HIS_997 barcode: TAAGCCATTGTCGAT; HIS_1001 barcode: TTCCACTTCGCGAT; HIS_1006 barcode: TAAGGCAACCACGAT; HIS_1201 barcode: CTGCAAGTTCGAT; HIS_1205 barcode: TAGGTGGTTCGAT; HIS_1207 barcode: AGGCAATTGCGAT; HIS_1209 barcode: AACCTCATTCGAT; HIS_1216 barcode: CGAGGTTATCGAT; HIS_1219 barcode: AAGGAATCGTCGAT; HIS_1221 barcode: AGCACGAATCGAT; HIS_1214 barcode: TTCTAAGAGACGAT
design description
adult
http://www.ebi.ac.uk/efo/EFO_0001272
dev stage
mop_p3636_c01.fastq.gz
filename
Ion Torrent Proton
instrument model
mop_p3636
library id
single
library layout
Reduced Representation
library selection
GENOMIC
http://www.ebi.ac.uk/efo/EFO_0008479
library source
RAD-Seq
library strategy
Magallana gigas
http://purl.obolibrary.org/obo/NCBITaxon_29159
organism
ION_TORRENT
platform
mix
http://purl.obolibrary.org/obo/NCIT_C64925
strain
mantle
http://purl.obolibrary.org/obo/CL_0000236
tissue
GBS (pool) of Cgigas mantle
title
pool_of_indiv
title