characteristics.text: SAMN26417900
characteristics.characteristic: External Id
characteristics.text: Institucion Universitaria Colegio Mayor de Antioquia
characteristics.characteristic: INSDC center name
characteristics.text: 2024-06-01T00:52:31.043Z
characteristics.characteristic: INSDC first public
characteristics.text: 2024-06-01T00:52:31.043Z
characteristics.characteristic: INSDC last update
characteristics.text: SRS12172799
characteristics.characteristic: INSDC secondary accession
characteristics.text: live
characteristics.characteristic: INSDC status
characteristics.text: MIMS.me
characteristics.characteristic: NCBI submission model
characteristics.text: MIGS/MIMS/MIMARKS.human-gut
characteristics.characteristic: NCBI submission model
characteristics.text: MIMS.me.human-gut.6.0
characteristics.characteristic: NCBI submission package
characteristics.text: SRS12172799
characteristics.characteristic: SRA accession
characteristics.text: 2016-11-03
characteristics.characteristic: collection_date
characteristics.text: Keywords: GSC:MIxS;MIMS:6.0
characteristics.characteristic: description
characteristics.text: Genomic DNA was extracted using the PowerSoil DNA Isolation Kit (MoBio). For amplification, we implemented a PCR of the variable region V1-V2 of the rRNA 16S gene (primers 27F and 338R). After purified, libraries (100 ng) were taken to Ion One Touch for clonal amplification and finally, the sequencing was performed in IonTorrent PGM.
characteristics.characteristic: design_description
characteristics.text: human gut biome
characteristics.characteristic: env_broad_scale
characteristics.text: rectal zone
characteristics.characteristic: env_local_scale
characteristics.text: feces
characteristics.characteristic: env_medium
characteristics.text: G5_R1.fastq.gz
characteristics.characteristic: filename
characteristics.text: fastq
characteristics.characteristic: filetype
characteristics.text: Brazil: Boa Vista
characteristics.characteristic: geo_loc_name
characteristics.text: Homo sapiens
characteristics.characteristic: host
characteristics.text: Ion Torrent PGM
characteristics.characteristic: instrument_model
characteristics.text: 2.86 N 60.70 W
characteristics.characteristic: lat_lon
characteristics.text: G5
characteristics.characteristic: library_id
characteristics.text: single
characteristics.characteristic: library_layout
characteristics.text: PCR
characteristics.characteristic: library_selection
characteristics.text: METAGENOMIC
characteristics.characteristic: library_source
characteristics.text: AMPLICON
characteristics.characteristic: library_strategy
characteristics.text: gut metagenome
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/NCBITaxon_749906
characteristics.characteristic: organism
characteristics.text: ION_TORRENT
characteristics.characteristic: platform
characteristics.text: MIMS Environmental/Metagenome sample from gut metagenome
characteristics.characteristic: title
characteristics.text: G5: Manaus babies
characteristics.characteristic: title