characteristics.text: SAMN24802800
characteristics.characteristic: External Id
characteristics.text: Institute of Pathogen Biology, CAMS & PUMC
characteristics.characteristic: INSDC center name
characteristics.text: 2024-01-19T00:50:25.520Z
characteristics.characteristic: INSDC first public
characteristics.text: 2024-01-19T00:50:25.520Z
characteristics.characteristic: INSDC last update
characteristics.text: SRS11680470
characteristics.characteristic: INSDC secondary accession
characteristics.text: live
characteristics.characteristic: INSDC status
characteristics.text: MIMARKS.specimen
characteristics.characteristic: NCBI submission model
characteristics.text: MIGS/MIMS/MIMARKS.host-associated
characteristics.characteristic: NCBI submission model
characteristics.text: MIMARKS.specimen.host-associated.6.0
characteristics.characteristic: NCBI submission package
characteristics.text: SRS11680470
characteristics.characteristic: SRA accession
characteristics.text: NA
characteristics.characteristic: collection_date
characteristics.text: Total genomic DNA from cecal and colonic contents derived from 20-day-old specific germ free (SPF) WT C57Bl/6J mice was extracted using QIAamp DNA Stool Mini Kit (QIAGEN). The V4 region of 16S rRNA gene were amplified with the published primer pair of 515F and 806R, followed by sequencing using an Ion S5 XL platform and 400 bp single-end reads were generated.
characteristics.characteristic: description
characteristics.text: NA
characteristics.characteristic: env_broad_scale
characteristics.text: NA
characteristics.characteristic: env_local_scale
characteristics.text: NA
characteristics.characteristic: env_medium
characteristics.text: USA: Baltimore
characteristics.characteristic: geo_loc_name
characteristics.text: Mus musculus
characteristics.characteristic: host
characteristics.text: 20 days
characteristics.characteristic: host_age
characteristics.text: none, healthy
characteristics.characteristic: host_disease
characteristics.text: wild-type
characteristics.characteristic: host_genotype
characteristics.text: cecal and colonic contents
characteristics.characteristic: host_tissue_sampled
characteristics.text: 29420293
characteristics.characteristic: isol_growth_condt
characteristics.text: NA
characteristics.characteristic: lat_lon
characteristics.text: mouse gut metagenome
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/NCBITaxon_410661
characteristics.characteristic: organism
characteristics.text: 5
characteristics.characteristic: samp_size
characteristics.text: 16S rRNA gene sequencing
characteristics.characteristic: sample type
characteristics.text: C57BL/6 background
characteristics.characteristic: strain
characteristics.text: 16S rRNA gene sequencing of cecal and colonic contents derived from SPF WT C57Bl/6J pups (n=5)
characteristics.characteristic: title