1
Bread.Tray..
EU.CH.5.5.1.2.L
Clone ID
EU.CH.5.5.1.2.L
Clone.ID
SAMN36452942
External Id
2
Flower.Number
Yes
Flowering.
2
Fruit.Number
Fragaria vesca
Host
University of Pittsburgh
INSDC center name
2024-05-02T00:00:00Z
INSDC first public
2024-05-02T07:59:03.780Z
INSDC last update
SRS18312819
INSDC secondary accession
live
INSDC status
27.29
Largest_central_leaf_width_mm
9
Leaf_number
2020-06-26T00:00:00
Measurement.Date
EU.CH.5.5.1
Mother.ID
Metagenome or environmental
NCBI submission model
Metagenome.environmental.1.0
NCBI submission package
leaf
Organ
2023-12-01T00:00:00
Picture.1.Taken..Date.
2023-12-01T00:00:00
Picture.2.Taken..Date.
APP2020_CH.5.5.1.2.L_01
Picture.Name.1
APP2020_CH.5.5.1.2.L_02
Picture.Name.2
EU.CH.5.5.1.2
Plant ID
EU.CH.5.5.1.2
Plant.ID
2X
Ploidy
14.92355179
SLA
SRS18312819
SRA accession
Plant
Sample_type
39
Stomate_count_1
40
Stomate_count_2
0.02
Stomate_length_1_Pic1
0.02
Stomate_length_1_Pic2
0.019
Stomate_length_2_Pic1
0.018
Stomate_length_2_Pic2
0.019
Stomate_length_3_Pic2
0.018
Stomate_length_3_pic1
NA
Trichome.Count.Abaxial..Lower.
NA
Trichome.Count.Adaxial.Square.1
NA
Trichome.Count.Adaxial.Square.2
2023-04-22T00:00:00
Trichome.Count.Date
EO
Trichome.Counter.Initials
12
Trichome_Count_Abaxial_Square_1
14
Trichome_Count_Abaxial_Square_2
98
Trichome_Count_Adaxial_Upper
NA
Vein.Count.Abaxial..Lower.
NA
Vein.Count.Adaxial..Upper.
39.5
average_stomate_count
0.019
average_stomate_length
leaf_EU.CH.5.5.1.2.L
clone.organ
2020-12-12
collection date
Extractions with Zymo Quick-DNA Fecal/Soil Microbe Miniprep, amplification with 799f and 1115r primers
design_description
EU.CH.5.5.1
ecotype
Northeastern United States
env_broad_scale
outdoor common garden
env_local_scale
APP2020_034_S11_L001_R1_001_16S.fastq.gz
filename
APP2020_034_S11_L001_R2_001_16S.fastq.gz
filename2
fastq
filetype
USA
geo_loc_name
Illumina MiSeq
instrument_model
40.442898
latitude
40.442898 N 79.929431 W
latitude and longitude
23.75829444
leaf_punch_area_mm
1.592
leaf_punch_mass_mg
2022-03-18T00:00:00
leaf_punch_weigh_date
APP2020_034
library_ID
paired
library_layout
PCR
library_selection
GENOMIC
library_source
AMPLICON
library_strategy
-79.929431
longitude
plant metagenome
http://purl.obolibrary.org/obo/NCBITaxon_1297885
organism
ILLUMINA
platform
Yes
sequenced
paired end 16s sequences of Fragaria vesca microbiome
title
Metagenome or environmental sample from plant metagenome
title