SAMN36746176
External Id
QIAamp PowerFecal Pro DNA Kit
Extraction_Method
BC1_S125_L001_R2_001.fastq.gz
Filename
BC1_S125_L001_R1_001.fastq.gz
Filename
fastq
Filetype
University of Auckland
INSDC center name
2024-08-01T00:50:49.063Z
INSDC first public
2024-08-01T00:50:49.063Z
INSDC last update
SRS18442573
INSDC secondary accession
live
INSDC status
Illumina MiSeq
Instrument model
paired
Library layout
PCR
Library selection
GENOMIC
Library source
AMPLICON
Library strategy
Metagenome or environmental
NCBI submission model
Metagenome.environmental.1.0
NCBI submission package
ILLUMINA
Platform
RNAlater
Preservation_ method
SRS18442573
SRA accession
feces
Source
2022-08-02
collection_date
Samples collected and pooled in polypropylene tubes and placed in ice, after which the samples were transported to the lab, pooled further and subsampled into smaller polypropylene tubes and preserved with RNAlater, stored overnight in 4° celsius and then placed in the freezer at -20° celcius. Samples were then processed through the QIAamp PowerFecal Pro DNA Kit and the raw DNA extracts were evaluated for DNA Yield, Purity and Integrity. Subsequently all raw extracts were subjected through 16S rRNA gene amplification with PCR and sequenced by Auckland Genomics Ltd.
description
New Zealand
geo_loc_name
Gus rubicunda
host
Auckland Zoo
isolation_source
Not Collected
lat_lon
gut metagenome
http://purl.obolibrary.org/obo/NCBITaxon_749906
organism
BC1_S125
source_material_id
fecal 16S rRNA gene community
title