SAMN36863842
External Id
University of Tasmania (Sandy Bay)
INSDC center name
2024-01-07T00:50:14.613Z
INSDC first public
2024-01-07T00:50:14.613Z
INSDC last update
SRS18525737
INSDC secondary accession
live
INSDC status
MIMS.me
NCBI submission model
MIGS/MIMS/MIMARKS.host-associated
NCBI submission model
MIMS.me.host-associated.6.0
NCBI submission package
w10311-rpt1-16S4-setA_S93_L001_R1_001.fastq
Replicate 1
w10311-rpt1-16S4-setA_S93_L001_R2_001.fastq
Replicate 2
w10311-rpt1-ITS2-setD_S189_L001_R1_001.fastq
Replicate 3
w10311-rpt1-ITS2-setD_S189_L001_R2_001.fastq
Replicate 4
SRS18525737
SRA accession
Free-living
biol_stat
Fluralaner
chem_administration
2022
collection_date
Swab
collection_method
All samples and controls were PCR-amplified and uniquely barcoded for Next-Generation Sequencing (NGS) using primers 515F/806r. DNA sequencing was performed on an Illumina MiSeq (v2, 2x250bp) at the Ramaciotti Center for Genomics (UNSW, Sydney)
description
Skin
env_broad_scale
Skin
env_local_scale
Skin
env_medium
Australia: Cape Portland, Tasmania
geo_loc_name
Vombatus ursinus
host
Bare-nosed wombat
host_common_name
Sarcoptic mange
host_disease
male
host_sex
40.75 S 147.95 E
lat_lon
NA
neg_cont_type
skin metagenome
http://purl.obolibrary.org/obo/NCBITaxon_1338477
organism
W1
title