SAMN44513441
External Id
University of Nebraska-Lincoln
INSDC center name
2025-01-14T00:40:16.503Z
INSDC first public
2025-01-14T00:40:16.503Z
INSDC last update
SRS23112718
INSDC secondary accession
live
INSDC status
missing
Isolate 1 - Collection Date
not applicable
Isolate 1 - Collection Depth
not applicable
Isolate 1 - Collection Method
Mutant of chlorovirus PBCV-1.
Isolate 1 - Description
not applicable
Isolate 1 - Environment (broad scale)
not applicable
Isolate 1 - Environment (local scale)
not applicable
Isolate 1 - Geographic Location
EPA-11_PBCV-1
Isolate 1 - Isolate
plaque assay, plaque purification
Isolate 1 - Isolation Method
viral plaque
Isolate 1 - Isolation Source
PMID: 22696644
Isolate 1 - Isolation and Growth Conditions
Chlorella variabilis [NC64A]
Isolate 1 - Laboratory Host Strain used for Isolation
not applicable
Isolate 1 - Latitude and Longitude
lytic
Isolate 1 - Propagation
Alphachlorovirus
Isolate 1 - Subgenus
Chlorovirus PBCV-1 mutant EPA-11
Isolate 1 - Title
2006
Isolate 2 - Collection Date
0.1-1.0 meter
Isolate 2 - Collection Depth
scooping of water into sample container
Isolate 2 - Collection Method
Chlorovirus isolate derived from environmental water sample.
Isolate 2 - Description
not collected
Isolate 2 - Environment (broad scale)
not collected
Isolate 2 - Environment (local scale)
JX997155
Isolate 2 - GenBank Accession
Brazil: Sao Paolo
Isolate 2 - Geographic Location
Br0604L
Isolate 2 - Isolate
plaque assay, plaque purification
Isolate 2 - Isolation Method
viral plaque
Isolate 2 - Isolation Source
PMID: 22696644
Isolate 2 - Isolation and Growth Conditions
Chlorella heliozoae [SAG 3.83]
Isolate 2 - Laboratory Host Strain used for Isolation
SAG 3.83
Isolate 2 - Laboratory Host Strain(s)
not collected
Isolate 2 - Latitude and Longitude
lytic
Isolate 2 - Propagation
Gammachlorovirus
Isolate 2 - Subgenus
Chlorovirus Br0604L
Isolate 2 - Title
MIGS/MIMS/MIMARKS.water
NCBI submission model
MIGS.vi
NCBI submission model
MIGS.vi.water.6.0
NCBI submission package
SRS23112718
SRA accession
not applicable
collection_date
not applicable
depth
This BioSample consists of genomic DNA extracted from two individual chlorovirus isolates. The DNA was extracted from purified virus separately for each isolate. For sequencing, an equal amount of genomic DNA from each isolate was pooled together.
description
not applicable
env_broad_scale
not applicable
env_local_scale
not applicable
env_medium
not applicable
geo_loc_name
not applicable
isol_growth_condt
not applicable
isolate
not applicable
lat_lon
Chlorovirus sp.
http://purl.obolibrary.org/obo/NCBITaxon_2809302
organism
not applicable
propagation
Pooled Genomic DNA of Chlorovirus Isolates EPA-11 and Br0604L
title