SAMN38035059
External Id
Qingdao University
INSDC center name
2024-02-27T00:00:00Z
INSDC first public
2024-02-27T00:40:03.258Z
INSDC last update
SRS19315100
INSDC secondary accession
live
INSDC status
Metagenome or environmental
NCBI submission model
Metagenome.environmental.1.0
NCBI submission package
SRS19315100
SRA accession
2022-09-09
collection_date
Sexually mature male mice, treated with colistin for 7 days (1 mg/mL in sterile drinking water)
description
The experiment was conducted by Genesky Biotechnology Limited (Shanghai, China). Accu 16S absolute quantification was used to construct a 16S amplicon library by adding a certain amount of spik-IN standard synthetic sequence to the DNA extracted from feces, and the library was sequenced using Illumina 2254 bp double-ended sequencing strategy
design_description
COL211_R1.fastq
filename
COL211_R2.fastq
filename2
fastq
filetype
not applicable
geo_loc_name
mice
host
Illumina NovaSeq 6000
instrument_model
feces
isolation_source
not applicable
lat_lon
COL211
library_id
paired
library_layout
PCR
library_selection
TRANSCRIPTOMIC
library_source
AMPLICON
library_strategy
gut metagenome
http://purl.obolibrary.org/obo/NCBITaxon_749906
organism
ILLUMINA
platform
211
source_material_id
16S rRNA sequencing of mice gut microbiome
title
COL1
title