B0731
Alternate Nomenclature
SAMN38637667
External Id
Wayne State University
INSDC center name
2023-12-04T00:00:00Z
INSDC first public
2024-05-28T15:41:10.651Z
INSDC last update
SRS20483037
INSDC secondary accession
live
INSDC status
USA
ISO_country_code
UGFMB
Kreiswirth spa type
Pathogen.cl
NCBI submission model
Pathogen.cl.1.0
NCBI submission package
none
Other Isolates from Patient
Detroit Medical Center > Berti
Provenance
t9873
Ridom spa type
SRS20483037
SRA accession
GCA_039699835.1
assembly_ID
Andrew D. Berti
collected_by
2021-07-16
collection_date
2021
collection_year
alias: B0731
description
ST188-MSSA CC1
genotype
Staphylococcus
genus
USA: Detroit, MI
geo_loc_name
Homo sapiens
host
68
host_age
Patient presents with an acute exacerbation of undiagnosed chronic obstructive pulmonary disease. Clinical course was complicated by acute hypoxic respiratory failure, encephalopathy and septic shock secondary to an Escherichia coli urinary tract infection and staphylococcal bacteremia secondary to poor skin integrity. Medical management included vancomycin plus cefepime subsequently consolidated to ceftriaxone. Patient was stabilized and discharged to homeless shelter with levofloxacin plus rifampicin to complete 14 days of therapy. Duration of bacteremia: 1 day.
host_description
chronic obstructive pulmonary disease exacerbation
host_disease
recovery
host_disease_outcome
female
host_sex
BSS79
host_subject_id
Staphylococcus aureus str BSN79
isolate
blood
isolation_source
blood
isolation_source_category
42.33 N 83.05 W
lat_lon
susceptible
methicillin susceptibility
Staphylococcus aureus
http://purl.obolibrary.org/obo/NCBITaxon_1280
organism
BSN79
strain
BSN79
title