B0843
Alternate Nomenclature
SAMN38637744
External Id
Wayne State University
INSDC center name
2023-12-04T00:00:00Z
INSDC first public
2024-09-09T07:25:33.499Z
INSDC last update
SRS20736286
INSDC secondary accession
live
INSDC status
USA
ISO_country_code
TMMK
Kreiswirth spa type
Pathogen.cl
NCBI submission model
Pathogen.cl.1.0
NCBI submission package
none
Other Isolates from Patient
Detroit Medical Center > Berti
Provenance
t463
Ridom spa type
SRS20736286
SRA accession
GCA_038096305.1
assembly_ID
Andrew D. Berti
collected_by
2021-11-17
collection_date
2021
collection_year
alias: B0843
description
ST5-MRSA-IVg CC5
genotype
Staphylococcus
genus
USA: Detroit, MI
geo_loc_name
Homo sapiens
host
45
host_age
Patient with end-stage renal disease presents with altered mental status after missing dialysis session. On presentation, patient was febrile, tachycardic (> 140 beats per minute) with serum creatinine above 20 mg/dL. Staphylococcal bacteremia was identified on blood culture and managed with vancomycin. Clinical course was complicated by COVID-19 positivity, cardiac arrest, acute hypoxemic respiratory failure secondary to pulmonary emboli, mitral valve infective endocarditis and inflammation at the hemodialysis access site. Patient continued to require vasopressor support, family decided to make the patient do not resuscitate/do not intubate status and the patient expired. Duration of bacteremia: 4 days.
host_description
central line-associated bloodstream infection
host_disease
death
host_disease_outcome
male
host_sex
BSS164
host_subject_id
Staphylococcus aureus str BSN164
isolate
blood
isolation_source
blood
isolation_source_category
42.33 N 83.05 W
lat_lon
resistant
methicillin susceptibility
Staphylococcus aureus
http://purl.obolibrary.org/obo/NCBITaxon_1280
organism
BSN164
strain
BSN164
title