B0867
Alternate Nomenclature
SAMN38637752
External Id
Wayne State University
INSDC center name
2023-12-04T00:00:00Z
INSDC first public
2024-05-28T15:41:10.890Z
INSDC last update
SRS20736300
INSDC secondary accession
live
INSDC status
USA
ISO_country_code
TJMBMDMGMDK
Kreiswirth spa type
Pathogen.cl
NCBI submission model
Pathogen.cl.1.0
NCBI submission package
none
Other Isolates from Patient
Detroit Medical Center > Berti
Provenance
Unknown
Ridom spa type
SRS20736300
SRA accession
GCA_038396915.1
assembly_ID
Andrew D. Berti
collected_by
2022-01-01
collection_date
2022
collection_year
alias: B0867
description
ST231-MRSA-II CC5
genotype
Staphylococcus
genus
USA: Detroit, MI
geo_loc_name
Homo sapiens
host
65
host_age
Patient with history of end-stage renal disease and bilateral pneumonia presents from skilled nursing facility with labored breathing and tachycardia. Clinical course was complicated by staphylococcal bacteremia, septic shock, acute metabolic encephalopathy and recurrent, partially-loculated right pleural effusions. Patient was managed medically with vancomycin, transitioned to vancomycin plus daptomycin and subsequently vancomycin plus ceftaroline. Patient became hypoxic requiring emergent intubation but developed asystole and expired. Duration of bacteremia: 10 days.
host_description
pneumonia
host_disease
death
host_disease_outcome
male
host_sex
BSS172
host_subject_id
Staphylococcus aureus str BSN172
isolate
blood
isolation_source
blood
isolation_source_category
42.33 N 83.05 W
lat_lon
resistant
methicillin susceptibility
Staphylococcus aureus
http://purl.obolibrary.org/obo/NCBITaxon_1280
organism
BSN172
strain
BSN172
title