B0823
Alternate Nomenclature
SAMN38637725
External Id
Wayne State University
INSDC center name
2023-12-04T00:00:00Z
INSDC first public
2024-09-09T07:25:33.174Z
INSDC last update
SRS20598508
INSDC secondary accession
live
INSDC status
USA
ISO_country_code
TJMBMDMGMK
Kreiswirth spa type
Pathogen.cl
NCBI submission model
Pathogen.cl.1.0
NCBI submission package
none
Other Isolates from Patient
Detroit Medical Center > Berti
Provenance
t002
Ridom spa type
SRS20598508
SRA accession
GCA_038672395.1
assembly_ID
Andrew D. Berti
collected_by
2021-10-29
collection_date
2021
collection_year
alias: B0823
description
ST5-MRSA-II CC5
genotype
Staphylococcus
genus
USA: Detroit, MI
geo_loc_name
Homo sapiens
host
77
host_age
Patient presents with acute kidney injury and acute hypoxic respiratory failure due to COVID-19 pneumonia. Clinical course was complicated by staphylococcal bacteremia and fungemia. Following clinical deterioration, family decided to pursue comfort cares and patient was discharged to inpatient hospice. Duration of bacteremia: 1 day.
host_description
COVID-19 pneumonia
host_disease
death
host_disease_outcome
male
host_sex
BSS146
host_subject_id
Staphylococcus aureus str BSN146
isolate
blood
isolation_source
blood
isolation_source_category
42.33 N 83.05 W
lat_lon
resistant
methicillin susceptibility
Staphylococcus aureus
http://purl.obolibrary.org/obo/NCBITaxon_1280
organism
BSN146
strain
BSN146
title