B0736
Alternate Nomenclature
SAMN38637672
External Id
Wayne State University
INSDC center name
2023-12-04T00:00:00Z
INSDC first public
2024-09-09T07:25:32.734Z
INSDC last update
SRS20485605
INSDC secondary accession
live
INSDC status
USA
ISO_country_code
XKAOBO
Kreiswirth spa type
Pathogen.cl
NCBI submission model
Pathogen.cl.1.0
NCBI submission package
none
Other Isolates from Patient
Detroit Medical Center > Berti
Provenance
t1451
Ridom spa type
SRS20485605
SRA accession
GCA_037045965.2
assembly_ID
Andrew D. Berti
collected_by
2021-07-19
collection_date
2021
collection_year
alias: B0736
description
ST398-MSSA
genotype
Staphylococcus
genus
USA: Detroit, MI
geo_loc_name
Homo sapiens
host
56
host_age
Patient with recent cervical fracture, status-post laminectomy and tracheostomy, presented from subacute rehabilitation for evaluation of septic shock. Workup revealed acute respiratory failure secondary to staphylococcal bacteremia with new sacral ulceration as presumed source. Clinical course was complicated by a cervical spine hematoma extending into the interspinous space, ligamentum flavum disruption secondary to same, superventricular tachycardia refractory to cardioversion, acute kidney injury with acute tubular necrosis in the context of active urosepsis, severe protein calorie malnutrition and acute-on-chronic anemia secondary to hematuria. Patient was managed medically with cefazolin to be continued on discharge. Patient was a poor candidate for spinal surgery and could not receive transesophageal echocardial imaging due to spinal injury. Patient was stabilized and discharged to subacute rehabilitation facility. Duration of bacteremia: 4 days.
host_description
septic shock
host_disease
recovery
host_disease_outcome
male
host_sex
BSS84
host_subject_id
Staphylococcus aureus str BSN84
isolate
blood
isolation_source
blood
isolation_source_category
42.33 N 83.05 W
lat_lon
susceptible
methicillin susceptibility
Staphylococcus aureus
http://purl.obolibrary.org/obo/NCBITaxon_1280
organism
BSN84
strain
BSN84
title