SAMN39598599
External Id
National Jewish Health
INSDC center name
2024-01-24T00:00:00Z
INSDC first public
2024-10-17T12:35:15.186Z
INSDC last update
SRS20244131
INSDC secondary accession
live
INSDC status
Pathogen.cl
NCBI submission model
Pathogen.cl.1.0
NCBI submission package
SRS20244131
SRA accession
National Jewish Health (Denver, CO)
collected_by
2022
collection_date
NC00833-00787 confirmatory WGS
description
Mexico
geo_loc_name
Homo sapiens
host
38 years
host_age
38-year-old woman with multiple sclerosis who received two intrathecal stem cell injections as a treatment for her multiple sclerosis, complicated by M. abscessus subsp. massiliense meningitis.
host_description
meningitis
host_disease
Successful antimicrobial treatment with disease remission.
host_disease_outcome
Ill with notable signs of meningitis.
host_health_state
female
host_sex
cerebral spinal fluid
host_tissue_sampled
NC00833-00787.R1
isolate
Infected at a commercial stem cell injection clinic
isolation_source
23.63 N 102.55 W
lat_lon
Mycobacteroides abscessus subsp. massiliense
http://purl.obolibrary.org/obo/NCBITaxon_1962118
organism
massiliense
sub_species
Mycobaterium abscessus subsp. massiliense
subgroup
Pathogen: clinical or host-associated sample from Mycobacteroides abscessus subsp. massiliense
title