SAMD00876283
External Id
Gunma University
INSDC center name
2025-01-17T00:00:00Z
INSDC first public
2025-01-16T23:50:40Z
INSDC last update
live
INSDC status
MIMARKS.survey.soil
NCBI submission model
MIMARKS.survey.soil.6.0
NCBI submission package
2023-01-06
collection_date
not applicable
depth
Soil extract collected on 2022/9/30 from soil at Gunma University, Japan. The sample was incubated in a BOD-based biodegradability culture with LDPE at 25 degree Celsius for 99 days. Metagenome DNA was extracted, and the 16S rRNA gene V4 region was amplified for amplicon sequencing to analyze microbial community involved in PE biodegradation.
description
not applicable
elev
not applicable
env_broad_scale
not applicable
env_local_scale
BOD-based biodegradability culture medium
env_medium
missing: lab stock
geo_loc_name
not applicable
lat_lon
soil metagenome
http://purl.obolibrary.org/obo/NCBITaxon_410658
organism
LDPE
sample_name
16S rRNA gene V4 region amplicon sequences derived from metagenome DNA extracted from soil extract collected on 2022/9/30, incubated in a BOD-based biodegradability culture with LDPE at 25 degree Celsius for 99 days
title
410658
tot_org_c_meth
PRJDB18604
tot_org_carb