SAMN40407683
External Id
University of California San Diego
INSDC center name
2024-03-15T00:00:00Z
INSDC first public
2024-03-15T11:26:07.587Z
INSDC last update
SRS20727006
INSDC secondary accession
live
INSDC status
Metagenome or environmental
NCBI submission model
Metagenome.environmental.1.0
NCBI submission package
SRS20727006
SRA accession
yes
abx_during_pregnancy
yes
abx_for_chorio
yes
abx_for_pprom
yes
abx_ppx_for_delivery
not applicable
apgar_at_10_min
4
apgar_at_1_min
8
apgar_at_5_min
26
birth_head_circumference
38
birth_length
1175
birth_weight
0
blood_transfusions
yes
bmz_during_pregnancy
yes
chorioamionitis
2020
collection_date
0
days_intubated
2
days_on_abx
0
days_on_antifungal
17
days_on_cpap_or_nimv
0
days_on_hfnc_greater_than_2_liters
5
days_on_hfnc_less_than_or_equal_to_2_liters
0
days_on_systemic_steroid
cesarian
delivery_method
NICU, neonate, week 10, milk
description
34.5
discharge_head_circumference
47
discharge_length_cm
3380
discharge_weight_g
47
dol_bottle_feed
46
dol_breast_feed
0
dol_enteral_feeding
47
dol_nonnutritive_sucking
82
duration_of_hospitalization_days
0
duration_of_rom
human
env_broad_scale
milk
env_local_scale
not applicable
env_medium
white/black
ethnicity
no
gastric_tube
USA:CA,San Diego
geo_loc_name
38.6
gestational_age_at_discharge_or_transfer_wks
27.1
gestatonal_age_at_birth_wk
1
gravida
EFC22, MBM20
home_feeding_regimen
no
home_oxygen
Homo sapiens
host
human
host_common_name
neonate
host_life_stage
J16
host_subject_id
9606
host_taxid
no
infant_received_surfactant
20
kcal_per_oz
32.9 N 117.2 W
lat_lon
22
maternal_age_yrs
mono-di twin, twin B w/ PPROM and ahydramnios
maternal_complications
NA
meconium_
MBM
milk_type
human milk metagenome
http://purl.obolibrary.org/obo/NCBITaxon_1633571
organism
P4
parent
2
parity
no
pprom
no
received_antacid
RA
sample_RespSupport
no
sample_abx
no
sample_antacid
no
sample_antifungal
yes
sample_bottlefeeding
yes
sample_breastfeeding
36
sample_days_start_bottle
37
sample_days_start_breastfeeding
NICU, neonate, week 10, milk, 2 sequencing runs merged
sample_details
MBM
sample_feedingcategory
MBM20, EFC 24
sample_feedingtype
Breastmilk
sample_milkcategory
after
sample_oralfeeds
no
sample_steroid
milk
sample_type
male
sex
no
surgery_during_admission
4
timepoint
Metagenome or environmental sample from human milk metagenome
title
yes
twin_gestation
Twin
twin_or_singleton
Pair 1
twin_pair
not applicable
type_of_steroid
10
week