SAMN40407716
External Id
University of California San Diego
INSDC center name
2024-03-15T00:00:00Z
INSDC first public
2024-03-15T11:26:02.348Z
INSDC last update
SRS20727012
INSDC secondary accession
live
INSDC status
Metagenome or environmental
NCBI submission model
Metagenome.environmental.1.0
NCBI submission package
SRS20727012
SRA accession
no
abx_during_pregnancy
yes
abx_for_chorio
yes
abx_for_pprom
yes
abx_ppx_for_delivery
not applicable
apgar_at_10_min
7
apgar_at_1_min
9
apgar_at_5_min
27
birth_head_circumference
39
birth_length
1025
birth_weight
0
blood_transfusions
yes
bmz_during_pregnancy
yes
chorioamionitis
2020
collection_date
0
days_intubated
2
days_on_abx
0
days_on_antifungal
7
days_on_cpap_or_nimv
0
days_on_hfnc_greater_than_2_liters
0
days_on_hfnc_less_than_or_equal_to_2_liters
0
days_on_systemic_steroid
vaginal
delivery_method
NICU, neonate, week 13, milk
description
36
discharge_head_circumference
52
discharge_length_cm
3830
discharge_weight_g
36
dol_bottle_feed
36
dol_breast_feed
0
dol_enteral_feeding
30
dol_nonnutritive_sucking
94
duration_of_hospitalization_days
21
duration_of_rom
human
env_broad_scale
milk
env_local_scale
not applicable
env_medium
hispanic, white
ethnicity
no
gastric_tube
USA:CA,San Diego
geo_loc_name
41
gestational_age_at_discharge_or_transfer_wks
27.5
gestatonal_age_at_birth_wk
2
gravida
AR20, PE30
home_feeding_regimen
no
home_oxygen
Homo sapiens
host
human
host_common_name
neonate
host_life_stage
J1
host_subject_id
9606
host_taxid
no
infant_received_surfactant
20
kcal_per_oz
32.9 N 117.2 W
lat_lon
32
maternal_age_yrs
oligohydramnios
maternal_complications
NA
meconium_
MBM
milk_type
human milk metagenome
http://purl.obolibrary.org/obo/NCBITaxon_1633571
organism
P1
parent
1
parity
yes
pprom
no
received_antacid
RA
sample_RespSupport
no
sample_abx
no
sample_antacid
no
sample_antifungal
yes
sample_bottlefeeding
yes
sample_breastfeeding
53
sample_days_start_bottle
53
sample_days_start_breastfeeding
NICU, neonate, week 13, milk, 2 sequencing runs merged
sample_details
MBM
sample_feedingcategory
MBM20, PE30
sample_feedingtype
Breastmilk
sample_milkcategory
after
sample_oralfeeds
no
sample_steroid
milk
sample_type
female
sex
no
surgery_during_admission
4
timepoint
Metagenome or environmental sample from human milk metagenome
title
no
twin_gestation
Singleton
twin_or_singleton
Singleton
twin_pair
not applicable
type_of_steroid
13
week