SAMN40418575
External Id
University of South Bohemia in Ceske Budejovice, Faculty of Science
INSDC center name
2024-03-12T00:00:00Z
INSDC first public
2024-04-04T10:19:41.498Z
INSDC last update
SRS20733521
INSDC secondary accession
live
INSDC status
MIMAG.host-associated
NCBI submission model
MIMAG.host-associated.6.0
NCBI submission package
SRS20733521
SRA accession
2020
collection_date
SRR28310198
derived-from
Neisseriaceae bacterium OTU5-Cg was assembled from metagenomic data derived from fur swab of bank vole Clethrionomys glareolus. In phylogenetic tree, this bacteium is closely related to endosymbionts of rodent lice. Our results suggest that these bacteria could potentially share their evolutionary origin.
description
fur microbiome of bank vole Clethrionomys glareolus
env_broad_scale
fur swab from bank vole Clethrionomys glareolus
env_local_scale
fur of Clethrionomys glareolus
env_medium
1
environmental-sample
Czechia: Branisov
geo_loc_name
Myodes glareolus
host
bank vole
host_common_name
447135
host_taxid
OTU5-Cg
isolate
fur swab of bank vole
isolation_source
48.9779858 N 14.4172706 E
lat_lon
rodent metagenome
metagenome-source
1
metagenomic
Neisseriaceae bacterium
http://purl.obolibrary.org/obo/NCBITaxon_2014784
organism
metagenomic assembly
sample-type
Neisseriaceae bacterium OTU5-Cg
title