SAMN40407750
External Id
University of California San Diego
INSDC center name
2024-03-15T00:00:00Z
INSDC first public
2024-03-15T11:26:11.082Z
INSDC last update
SRS20726931
INSDC secondary accession
live
INSDC status
Metagenome or environmental
NCBI submission model
Metagenome.environmental.1.0
NCBI submission package
SRS20726931
SRA accession
yes
abx_during_pregnancy
no
abx_for_chorio
no
abx_for_pprom
yes
abx_ppx_for_delivery
not applicable
apgar_at_10_min
8
apgar_at_1_min
9
apgar_at_5_min
27
birth_head_circumference
34.5
birth_length
1245
birth_weight
0
blood_transfusions
yes
bmz_during_pregnancy
no
chorioamionitis
2020
collection_date
1
days_intubated
0
days_on_abx
0
days_on_antifungal
9
days_on_cpap_or_nimv
0
days_on_hfnc_greater_than_2_liters
4
days_on_hfnc_less_than_or_equal_to_2_liters
0
days_on_systemic_steroid
cesarian
delivery_method
NICU, neonate, week 2, saliva
description
31
discharge_head_circumference
44
discharge_length_cm
2806
discharge_weight_g
35
dol_bottle_feed
24
dol_breast_feed
0
dol_enteral_feeding
31
dol_nonnutritive_sucking
56
duration_of_hospitalization_days
0
duration_of_rom
human
env_broad_scale
saliva
env_local_scale
not applicable
env_medium
hispanic
ethnicity
no
gastric_tube
USA:CA,San Diego
geo_loc_name
37
gestational_age_at_discharge_or_transfer_wks
29.1
gestatonal_age_at_birth_wk
1
gravida
MBM20, EFC24
home_feeding_regimen
no
home_oxygen
Homo sapiens
host
human
host_common_name
neonate
host_life_stage
J28
host_subject_id
9606
host_taxid
yes
infant_received_surfactant
not applicable
kcal_per_oz
32.9 N 117.2 W
lat_lon
27
maternal_age_yrs
Type II DM on insulin, gestational HTN w/ pre-eclampsia (required C-section), recurrent E. coli UTI (Macrobid x3), STI (chlamydia)
maternal_complications
NA
meconium_
not applicable
milk_type
human oral metagenome
http://purl.obolibrary.org/obo/NCBITaxon_447426
organism
P7
parent
1
parity
no
pprom
no
received_antacid
RA
sample_RespSupport
no
sample_abx
no
sample_antacid
no
sample_antifungal
no
sample_bottlefeeding
no
sample_breastfeeding
not applicable
sample_days_start_bottle
not applicable
sample_days_start_breastfeeding
NICU, neonate, week 2, saliva
sample_details
MBMFortifier
sample_feedingcategory
MBM20+HMF 24
sample_feedingtype
FortifiedBreastmilk
sample_milkcategory
before
sample_oralfeeds
no
sample_steroid
oral
sample_type
male
sex
no
surgery_during_admission
2
timepoint
Metagenome or environmental sample from human oral metagenome
title
no
twin_gestation
Singleton
twin_or_singleton
Singleton
twin_pair
not applicable
type_of_steroid
2
week