2025-01-23
ENA first public
ERC000011
ENA-CHECKLIST
UCSDMI
INSDC center name
public
INSDC status
ERS21171342
SRA accession
qiita_sid_14698:14698.156
Submitter Id
NA
aboral_surface
Da 53
aluminum_frozen
Unknown
animal_condition
DaBW 53
body_wall_rna_sample_1
NA
body_wall_rna_sample_2
Unknown
challenge_category
NA
coelomic_fluid_cytology_1
NA
coelomic_fluid_cytology_2
DaCF 53
coelomic_fluid_rna
2022-05-07
collection date
2022-05-07
collection_timestamp
Sharp/Delgado
collector
USA
country
Unknown
culture_time
Unknown
dasc_qpcr_positive
7-May-22
date
not collected
depth
5
depth_m
sea urchin gut sample for Diadematidae scuticociliatosis sea urchin microbiome
description
TRUE
dna_extracted
0
elevation
Host-associated
empo_1
Host-associated (saline)
empo_2
Animal (saline)
empo_3
Animal corpus (saline)
empo_4
marine biome
env_biome
animal-associated habitat
env_feature
intestine environment
env_material
host-associated
env_package
Unknown
experiment
Unknown
experiment_success
Unknown
experimental
Zymo Tissue Insect 96 (D6017)
extraction_kit
Unknown
forward_barcode
Unknown
forward_primer
USA:FL:Key Largo
geo_loc_name
USA
geographic location (country and/or sea)
DaG 53
gonads_rna
Grossly Normal (Healthy)
health
Da 53
histopath
Diadema antillarum
host scientific name
UBERON:gastrointestinal system
host_body_habitat
UBERON:lumen of gut
host_body_product
UBERON:digestive tract
host_body_site
sea urchins
host_common_name
156
host_subject_id
105358
host_taxid
Da53
id_number
Unknown
incubation_water
Florida Fish& Wildlife Conservation Commission
institution
DaI 53
intestines_rna
Unknown
investigator_id
United States
jurisdiction
24.95081
latitude
NA
loc1
C
loc10
SF
loc11
SF
loc12
SF
loc13
SF
loc14
NA
loc2
NA
loc3
C
loc4
SF
loc5
C
loc6
NA
loc7
C
loc8
C
loc9
Key Largo Florida 24.950810 -80.490360
location
-80.49036
longitude
53
molecular_micro_diadema_number
sea urchin metagenome
organism
intestine
original_sample_type
Cornell University
physical_specimen_location
FALSE
physical_specimen_remaining
2
platepcr_plate
2
platepico_plate
2
platestorage_plate
Unknown
primer_plate
Unknown
project
sea urchin gut
qiita_sample_type
Unknown
reverse_barcode
Unknown
reverse_primer
Unknown
round
Unknown
sample_date
DaI.53
sample_id
sample_number
sea urchin gut
sample_type
sea urchin metagenome
scientific_name
NA
site_diadema_number
species
specimen_type
DaS 53
spines_rna
Da Feces 53
tem_feces
Da Gut 53
tem_gut
Da Test 53
tem_test
27.2
temperature_c
14698.156
title
Investigating the influence of Diadematidae scuticociliatosis on host microbiome composition
title
treatment
watertype
well
D8
wellpcr_plate
D9
wellpico_plate
D8
wellstorage_plate