SAMN40418702
External Id
University of South Bohemia in Ceske Budejovice, Faculty of Science
INSDC center name
2024-03-12T00:00:00Z
INSDC first public
2024-04-04T10:19:41.517Z
INSDC last update
SRS20733522
INSDC secondary accession
live
INSDC status
MIMAG.host-associated
NCBI submission model
MIMAG.host-associated.6.0
NCBI submission package
SRS20733522
SRA accession
2020
collection_date
SRR28310197
derived-from
Neisseriaceae bacterium OTU5-Ma was assembled from metagenomic data generated for sample of a fur swab from a common vole Microtus arvalis. In the phylogenetic tree, this bacterium is closely related to endosymbionts of rodent lice. Our results suggest that these bacteria possibly share evolutionary origin.
description
fur microbiome of common vole Microtus arvalis
env_broad_scale
fur swab from common vole Microtus arvalis
env_local_scale
ridge fur of Microtus arvalis
env_medium
1
environmental-sample
Czechia: Branisov
geo_loc_name
Microtus arvalis
host
common vole
host_common_name
47230
host_taxid
OTU5-Ma
isolate
ridge fur swab of common vole
isolation_source
48.9779858 N 14.4172706 E
lat_lon
rodent metagenome
metagenome-source
1
metagenomic
Neisseriaceae bacterium
http://purl.obolibrary.org/obo/NCBITaxon_2014784
organism
metagenomic assembly
sample-type
Neisseriaceae bacterium OTU5-Ma
title