2025-01-23
ENA first public
ERC000011
ENA-CHECKLIST
UCSDMI
INSDC center name
public
INSDC status
ERS21171319
SRA accession
qiita_sid_14698:14698.135
Submitter Id
NA
aboral_surface
NA
aluminum_frozen
Unknown
animal_condition
DaBW 14a
body_wall_rna_sample_1
DaBW 14b
body_wall_rna_sample_2
Unknown
challenge_category
DaCF 14b
coelomic_fluid_cytology_1
DaCF 14b
coelomic_fluid_cytology_2
DaCF 14-RNA
coelomic_fluid_rna
2022-04-21
collection date
2022-04-21
collection_timestamp
Brandt (permit holder); Hewson
collector
Virgin Islands
country
Unknown
culture_time
Unknown
dasc_qpcr_positive
21-Apr-22
date
not collected
depth
3
depth_m
sea urchin gut sample for Diadematidae scuticociliatosis sea urchin microbiome
description
TRUE
dna_extracted
0
elevation
Host-associated
empo_1
Host-associated (saline)
empo_2
Animal (saline)
empo_3
Animal corpus (saline)
empo_4
marine biome
env_biome
animal-associated habitat
env_feature
intestine environment
env_material
host-associated
env_package
Unknown
experiment
Unknown
experiment_success
Unknown
experimental
Zymo Tissue Insect 96 (D6017)
extraction_kit
Unknown
forward_barcode
Unknown
forward_primer
USA:US Virgin Islands:Saint John
geo_loc_name
Virgin Islands
geographic location (country and/or sea)
DaG 14
gonads_rna
Grossly Normal (Healthy)-Control
health
Da3
histopath
Diadema antillarum
host scientific name
UBERON:gastrointestinal system
host_body_habitat
UBERON:lumen of gut
host_body_product
UBERON:digestive tract
host_body_site
sea urchins
host_common_name
135
host_subject_id
105358
host_taxid
Healthy #2
id_number
Unknown
incubation_water
University of Virgin Islands
institution
DaI 14
intestines_rna
Unknown
investigator_id
US Virgin Islands
jurisdiction
18.345103
latitude
NA
loc1
C
loc10
H
loc11
H
loc12
NA
loc13
NA
loc14
H
loc2
H
loc3
NA
loc4
NA
loc5
C
loc6
C
loc7
C
loc8
C
loc9
Pope Point, St. John
location
-64.693796
longitude
14
molecular_micro_diadema_number
sea urchin metagenome
organism
intestine
original_sample_type
Cornell University
physical_specimen_location
FALSE
physical_specimen_remaining
2
platepcr_plate
2
platepico_plate
2
platestorage_plate
Unknown
primer_plate
Unknown
project
sea urchin gut
qiita_sample_type
Unknown
reverse_barcode
Unknown
reverse_primer
Unknown
round
Unknown
sample_date
DaI.14
sample_id
sample_number
sea urchin gut
sample_type
sea urchin metagenome
scientific_name
3
site_diadema_number
species
specimen_type
DaS-14
spines_rna
NA
tem_feces
TEM Healthy 2 gut
tem_gut
TEM Healthy 2 test
tem_test
NA
temperature_c
14698.135
title
Investigating the influence of Diadematidae scuticociliatosis on host microbiome composition
title
treatment
watertype
well
G5
wellpcr_plate
G6
wellpico_plate
G5
wellstorage_plate