2025-01-28
ENA first public
ERC000047
ENA-CHECKLIST
BIOLOGY CENTRE CAS, INSTITUTE OF HYDROBIOLOGY
INSDC center name
public
INSDC status
ERS22980224
SRA accession
RPYR_VITGK-2
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
SPAdes
assembly software
kmer
binning parameters
MetaBAT
binning software
terrestrial biome
broad-scale environmental context
2022-09
collection date
99.81
%
completeness score
CheckM
completeness software
0
%
contamination score
Enrichment Culture of Rhodococcus pyridinivorans VITGK-2
description
oil contaminated soil
environmental medium
India
geographic location (country and/or sea)
12.938857
DD
geographic location (latitude)
79.150474
DD
geographic location (longitude)
Vellore, India
isolation_source
anthropogenic terrestrial biome
local environmental context
enrichment culture
metagenomic source
Rhodococcus pyridinivorans
organism
PRJEB85174
project name
ERS22974667
sample derived from
Rhodococcus pyridinivorans
scientific_name
multi-marker approach
taxonomic identity marker
Genomic sequencing of Rhodococcus pyridinivorans VITGK-2
title