SAMN41058874
External Id
Helmholtz Centre for Infection Research, HZI
INSDC center name
2024-07-22T00:00:00Z
INSDC first public
2024-07-22T05:41:02.454Z
INSDC last update
SRS21105040
INSDC secondary accession
live
INSDC status
Pathogen.cl
NCBI submission model
Pathogen.cl.1.0
NCBI submission package
SRS21105040
SRA accession
Dominik Schum
collected_by
2023-03-24
collection_date
USA: California, San Francisco, General Hospital
geo_loc_name
Homo sapiens
host
White man 36 years old HIV positive with substance abuse disorder
host_description
abscess, bacterial infection, bacterial pneumonia
host_disease
FPR3757
isolate
Isolated from a wrist abscess of a man in 2004
isolation_source
37.7554 N 122.4056 W
lat_lon
Staphylococcus aureus
http://purl.obolibrary.org/obo/NCBITaxon_1280
organism
Wild type strain isolated in 2006, meticillin-resistant Staphylococcus aureus. Maintained and used to generate the Nebraska Transposon Mutant Library. https://www.unmc.edu/pathology/csr/research/library.html. Frozen aliquots stored at TUM laboratories, revived and cultured in 2023.
passage_history
USA300 LAC stock 02 wild type
strain
Initial wild type of stock 02 at TUM of Staphylococcus aureus USA300 LAC (with natural plasmids) used as biological replicate on frequency of resistance (FoR) assays to obtain derivatives with increased MIC to compound L15
title