characteristics.text: SAMN41212664
characteristics.characteristic: External Id
characteristics.text: University of Dhaka
characteristics.characteristic: INSDC center name
characteristics.text: 2024-05-04T00:00:00Z
characteristics.characteristic: INSDC first public
characteristics.text: 2024-05-22T06:51:54.791Z
characteristics.characteristic: INSDC last update
characteristics.text: SRS21298663
characteristics.characteristic: INSDC secondary accession
characteristics.text: live
characteristics.characteristic: INSDC status
characteristics.text: Pathogen.cl
characteristics.characteristic: NCBI submission model
characteristics.text: Pathogen.cl.1.0
characteristics.characteristic: NCBI submission package
characteristics.text: SRS21298663
characteristics.characteristic: SRA accession
characteristics.text: Dr. Nurjahan Begum
characteristics.characteristic: collected_by
characteristics.text: 2022-05-12
characteristics.characteristic: collection_date
characteristics.text: MDR Klebsiella pneumoniae was isolated from the vaginal swab of an infertile woman. The sample was taken from Bangabandhu Sheikh Mujib Medical University (BSMMU) and sequenced at the Genome Centre, Infectious Diseases Division, ICDDR,B, then analyzed at the Food and Biotechnology Laboratory, Department of Microbiology, University of Dhaka, Bangladesh. Using different bioinformatics tools, the genome was analyzed for antibiotic-resistant genes, as well as other virulence and mobile genetic elements, including plasmids. To my knowledge, this is the first whole-genome sequencing of Klebsiella pneumoniae isolated from a vaginal swab of an infertile woman in Bangladesh. Thus, this effort will fill the data gap in Bangladesh and enrich the database, eventually enabling us to compare data from other regions, which may have an impact on public health.
characteristics.characteristic: description
characteristics.text: Bangladesh
characteristics.characteristic: geo_loc_name
characteristics.text: Homo sapiens
characteristics.characteristic: host
characteristics.text: 32 years
characteristics.characteristic: host_age
characteristics.text: Infertile woman of 32 years
characteristics.characteristic: host_description
characteristics.text: Pelvic inflammatory disease (PID)
characteristics.characteristic: host_disease
characteristics.text: Infertility
characteristics.characteristic: host_disease_outcome
characteristics.text: female
characteristics.characteristic: host_sex
characteristics.text: Vaginal Swab
characteristics.characteristic: isolation_source
characteristics.text: 23.739083 N 90.394000 E
characteristics.characteristic: lat_lon
characteristics.text: Klebsiella pneumoniae
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/NCBITaxon_573
characteristics.characteristic: organism
characteristics.text: CP4
characteristics.characteristic: strain
characteristics.text: Clinical or Host-Associated Isolation of Klebsiella pneumoniae from Vaginal Swab of an Infertile Woman with Pelvic Inflammatory Disease
characteristics.characteristic: title