SAMN41404961
External Id
Texas Tech University
INSDC center name
2024-05-15T00:00:00Z
INSDC first public
2024-05-15T13:01:32.847Z
INSDC last update
SRS21302809
INSDC secondary accession
live
INSDC status
Beta-lactamase
NCBI submission model
Beta-lactamase.1.0
NCBI submission package
SRS21302809
SRA accession
not provided
beta_lactamase_family
562.1475
bv_brc_id
no
carbapenemase
ampC-promoter:g.-1C>T, ampC-promoter:g.-18G>A
chromosomal_mutations
2022-10
collection_date
2023-10-02T00:00:00
date_for_experiment_in_lc
no
edta_inhibitor_tested
U00096, CU928164
genbank_accessions
Escherichia coli str. K-12 substr. MG1655
genome_name
USA: TEXAS
geo_loc_name
Canada Geese
host
IS5075, ISKpn19, MITEEc1, ISEc1, IS609, IS30, ISc30, ISEc1, IS26
insertion_sequences
Goose fecal
isolate
Escherichia coli
http://purl.obolibrary.org/obo/NCBITaxon_562
organism
Amp-Cro-Str-Tcy
phenotype
lncY
plasmid
2570347, 9278503, 16397293, 19165319
publication
blaCTX-M-15, blaTEM-1B, qnrS1, sul2, dfrA14,tet(A), aph(3")-lb
resistance
YT8 SP4F
sample_id
ST649
sequence_type
O8:H19
serotype
F11
table_id
Beta-lactamase sample from Escherichia coli
title
ESBL
type
yrehA, yehB, yehC, yehD,fdeC, terC, iss, hlyE, csgA, lpfA, nlpl, papC, fimH
virulence_genes