SAMN41404962
External Id
Texas Tech University
INSDC center name
2024-05-15T00:00:00Z
INSDC first public
2024-05-15T13:01:33.103Z
INSDC last update
SRS21302812
INSDC secondary accession
live
INSDC status
Beta-lactamase
NCBI submission model
Beta-lactamase.1.0
NCBI submission package
SRS21302812
SRA accession
not provided
beta_lactamase_family
562.147497
bv_brc_id
no
carbapenemase
ampC-promoter:g.-1C>T, ampC-promoter:g.-18G>A
chromosomal_mutations
2022-10
collection_date
2023-10-02T00:00:00
date_for_experiment_in_lc
no
edta_inhibitor_tested
CU928163, CU928148, CU928149, CP003289.1, CP003291.1, CP003290.1, CP003292.1
genbank_accessions
Escherichia coli UMN026, Escherichia coli O104:H4 str. 2011C-3493
genome_name
USA: TEXAS
geo_loc_name
Canada Geese
host
ISEc9, IS609, MITEEc1, ISEc1, cn-6298-ISEc1, IS26
insertion_sequences
Goose fecal
isolate
Escherichia coli
http://purl.obolibrary.org/obo/NCBITaxon_562
organism
Amc-Amp-Azt-Fox-Cro-Chl-Nal-Sxt-Sox
phenotype
2570347, 9278503, 16397293, 19165320
publication
blaCTX-M-55, dfrA17, aadA5, aph(6)-ld, tet(A), floR, aph(3")-lb,
resistance
YT2 MP9F
sample_id
ST901
sequence_type
O5:H20
serotype
F12
table_id
Beta-lactamase sample from Escherichia coli
title
ESBL
type
tia, shiA, gad, fimH, yehD, yehA, yehB, yehC, csgA, hlyE, nlpl, terC,fdeC
virulence_genes