SAMN41404958
External Id
Texas Tech University
INSDC center name
2024-05-15T00:00:00Z
INSDC first public
2024-05-15T13:01:32.657Z
INSDC last update
SRS21302826
INSDC secondary accession
live
INSDC status
Beta-lactamase
NCBI submission model
Beta-lactamase.1.0
NCBI submission package
SRS21302826
SRA accession
not provided
beta_lactamase_family
562.130207
bv_brc_id
no
carbapenemase
parC:p.E62K
chromosomal_mutations
2022-10
collection_date
2023-07-21T00:00:00
date_for_experiment_in_lc
no
edta_inhibitor_tested
BA000007, AB011549, AB011548
genbank_accessions
Escherichia coli O157:H7 str. Sakai
genome_name
USA: TEXAS
geo_loc_name
Canada Geese
host
IS421, MITEEc1, ISEc1, IS3, ISEc78, ISEc38, cn_1670_ISEc1, IS629, IS26
insertion_sequences
Goose fecal
isolate
Escherichia coli
http://purl.obolibrary.org/obo/NCBITaxon_562
organism
Amp-Cro
phenotype
Col(MG828), lncN
plasmid
9628576, 10734605, 11108008, 11111050, 11258796
publication
blaCTX-M-1, mph(A)
resistance
ecoliMC17F
sample_id
ST182
sequence_type
O26:H32
serotype
F8
table_id
Beta-lactamase sample from Escherichia coli
title
ESBL
type
ompT, gad, gad, iss, fimH, fdeC, nlpl, terC, hlyE, csgA, AsIA
virulence_genes