SAMN41404963
External Id
Texas Tech University
INSDC center name
2024-05-15T00:00:00Z
INSDC first public
2024-05-15T13:01:33.170Z
INSDC last update
SRS21302813
INSDC secondary accession
live
INSDC status
Beta-lactamase
NCBI submission model
Beta-lactamase.1.0
NCBI submission package
SRS21302813
SRA accession
not provided
beta_lactamase_family
562.147498
bv_brc_id
no
carbapenemase
ampC-promoter:g.-28G>A
chromosomal_mutations
2022-10
collection_date
2023-10-02T00:00:00
date_for_experiment_in_lc
no
edta_inhibitor_tested
CP001855, CP001856
genbank_accessions
Escherichia coli O83:H1 str. NRG 857C, Escherichia coli O157:H7 str. Sakai
genome_name
USA: TEXAS
geo_loc_name
Canada Geese
host
IS609, ISKpn26, ISEc1, MITEEc1, ISEc41, ISEc31,
insertion_sequences
Goose fecal
isolate
Escherichia coli
http://purl.obolibrary.org/obo/NCBITaxon_562
organism
Amc-Amp-Cro-Chl-Sxt
phenotype
17900983, 18312396, 21108814
publication
blaCTX-M-32,
resistance
YT3 SP02F
sample_id
ST675
sequence_type
O106:H45
serotype
F13
table_id
Beta-lactamase sample from Escherichia coli
title
ESBL
type
yehC, yehA, yehB, yehD, iss, fdeC, csgA, hlyE, nlpl, kpsE, kpsMll, ompT, terC, AslA, gad, fimH,
virulence_genes