characteristics.text: PROKKA (version 1.14.6)
characteristics.characteristic: 16S recovery software
characteristics.text: Yes
characteristics.characteristic: 16s recovered
characteristics.text: 2025-02-03
characteristics.characteristic: ENA first public
characteristics.text: ERC000050
characteristics.characteristic: ENA-CHECKLIST
characteristics.text: The Sainsbury Laboratory
characteristics.characteristic: GAL
characteristics.text: NOT PROVIDED
characteristics.characteristic: GAL_sample_id
characteristics.text: Tree of Life Programme
characteristics.characteristic: INSDC center name
characteristics.text: public
characteristics.characteristic: INSDC status
characteristics.text: Minimap2 (version 2.24-r1122)
characteristics.characteristic: MAG coverage software
characteristics.text: ERS23082185
characteristics.characteristic: SRA accession
characteristics.text: 1ffa583e-7968-466c-80c4-ec9303fe2d63
characteristics.characteristic: Submitter Id
characteristics.text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
characteristics.characteristic: assembly quality
characteristics.text: metaMDBG (version 0.3)
characteristics.characteristic: assembly software
characteristics.text: THE SAINSBURY LABORATORY
characteristics.characteristic: barcoding center
characteristics.text: coverage; graph; hic-mapping
characteristics.characteristic: binning parameters
characteristics.text: MAGScoT (version 1.0.0); MetaBat (version 2.15); bin3C (version 0.3.3); MaxBin (version 2.2.7); MetaTOR
characteristics.characteristic: binning software
characteristics.text: terrestrial biome
characteristics.characteristic: broad-scale environmental context
characteristics.text: KLARA SCHARNAGL | NICK TALBOT
characteristics.characteristic: collected_by
characteristics.text: UC BERKELEY | THE SAINSBURY LABORATORY
characteristics.characteristic: collecting institution
characteristics.text: 2021-10-17
characteristics.characteristic: collection date
characteristics.text: 97.26
characteristics.unit: %
characteristics.characteristic: completeness score
characteristics.text: checkM (version 1.2.2); checkM_DB (release 2015-01-16)
characteristics.characteristic: completeness software
characteristics.text: 0.75
characteristics.unit: %
characteristics.characteristic: contamination score
characteristics.text: adult lichen tissue
characteristics.characteristic: environmental medium
characteristics.text: United Kingdom
characteristics.characteristic: geographic location (country and/or sea)
characteristics.text: 52.72
characteristics.unit: DD
characteristics.characteristic: geographic location (latitude)
characteristics.text: 1.69
characteristics.unit: DD
characteristics.characteristic: geographic location (longitude)
characteristics.text: East Anglia | Norfolk | Winterton on Sea | Winterton Dunes
characteristics.characteristic: geographic location (region and locality)
characteristics.text: on ground of coastal dunes just above the beach
characteristics.characteristic: habitat
characteristics.text: not applicable
characteristics.characteristic: host life stage
characteristics.text: Cladonia diversa
characteristics.characteristic: host scientific name
characteristics.text: not applicable
characteristics.characteristic: host sex
characteristics.text: 50926
characteristics.characteristic: host taxid
characteristics.text: KLARA SCHARNAGL
characteristics.characteristic: identified_by
characteristics.text: UC BERKELEY
characteristics.characteristic: identifier_affiliation
characteristics.text: metagenome-assembled genome
characteristics.characteristic: investigation type
characteristics.text: Lichen: Cladonia diversa
characteristics.characteristic: isolation_source
characteristics.text: grassland biome
characteristics.characteristic: local environmental context
characteristics.text: lichen metagenome
characteristics.characteristic: metagenomic source
characteristics.text: 58
characteristics.characteristic: number of standard tRNAs extracted
characteristics.text: Acetobacteraceae bacterium
characteristics.characteristic: organism
characteristics.text: WHOLE ORGANISM
characteristics.characteristic: organism part
characteristics.text: ASG
characteristics.characteristic: project name
characteristics.text: NOT PROVIDED
characteristics.characteristic: proxy voucher
characteristics.text: selected by hand while hiking dunes stored in paper packet
characteristics.characteristic: sample collection method
characteristics.text: SAMEA117654182
characteristics.characteristic: sample derived from
characteristics.text: Acetobacteraceae bacterium
characteristics.characteristic: scientific_name
characteristics.text: Pacbio Sequel II
characteristics.characteristic: sequencing method
characteristics.text: SL0000002
characteristics.characteristic: specimen_id
characteristics.text: NOT_PROVIDED
characteristics.characteristic: specimen_voucher
characteristics.text: PROKKA (version 1.14.6)
characteristics.characteristic: tRNA extraction software
characteristics.text: GTDB-TK (version 2.4.0); GTDB (release 214)
characteristics.characteristic: taxonomic classification
characteristics.text: taxonomic novelty determined using RED
characteristics.characteristic: taxonomic identity marker
characteristics.text: 1ffa583e-7968-466c-80c4-ec9303fe2d63-asg-MAGScoT_cleanbin_000013
characteristics.characteristic: title
characteristics.text: glClaDive1.Acetobacteraceae_3
characteristics.characteristic: tolid