SAMN42396460
External Id
University of Pennsylvania
INSDC center name
2024-07-10T00:00:00Z
INSDC first public
2024-07-10T15:15:29.570Z
INSDC last update
SRS21952058
INSDC secondary accession
live
INSDC status
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
SRS21952058
SRA accession
Wildlife Futures Program (WFP) at the Pennsylvania Animal Diagnostic Laboratory System
collected_by
2023-03-15
collection_date
POLAR ARTIC protocol followed by Nextera XT Library Prep doi: 10.1101/2020.04.25.061499
design_description
VSP4203-1_S4_R1_001.fastq.gz
filename
VSP4203-1_S4_R2_001.fastq.gz
filename2
VSP4244-1_S52_R1_001.fastq.gz
filename3
VSP4244-1_S52_R2_001.fastq.gz
filename4
fastq
filetype
USA: Pennsylvania
geo_loc_name
Odocoileus virginianus
host
COVID-19
host_disease
NextSeq 2000
instrument_model
VSP30010
isolate
retropharyngeal lymph nodes
isolation_source
VSP30010
library_ID
paired
library_layout
RANDOM
library_selection
VIRAL RNA
library_source
WGS
library_strategy
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
ILLUMINA
platform
VSP30010
title
VSP30010
title