SAMN42396501
External Id
University of Pennsylvania
INSDC center name
2024-07-10T00:00:00Z
INSDC first public
2024-07-10T15:15:47.933Z
INSDC last update
SRS21952074
INSDC secondary accession
live
INSDC status
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
SRS21952074
SRA accession
Wildlife Futures Program (WFP) at the Pennsylvania Animal Diagnostic Laboratory System
collected_by
2024-01-13
collection_date
POLAR ARTIC protocol followed by Nextera XT Library Prep doi: 10.1101/2020.04.25.061499
design_description
VSP4240-1_S41_R1_001.fastq.gz
filename
VSP4240-1_S41_R2_001.fastq.gz
filename2
VSP4281-1_S89_R1_001.fastq.gz
filename3
VSP4281-1_S89_R2_001.fastq.gz
filename4
fastq
filetype
USA: Pennsylvania
geo_loc_name
Odocoileus virginianus
host
COVID-19
host_disease
NextSeq 2000
instrument_model
VSP31554
isolate
retropharyngeal lymph nodes
isolation_source
VSP31554
library_ID
paired
library_layout
RANDOM
library_selection
VIRAL RNA
library_source
WGS
library_strategy
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
ILLUMINA
platform
VSP31554
title
VSP31554
title