https://github.com/AusMicrobiome/contextualdb_doc/raw/4.2.0/db_schema_definitions/db_schema_definitions.xlsx
AustralianMicrobiome_metadata_defs_url
SAMN42490024
External Id
CSIRO
INSDC center name
2024-07-14T00:00:00Z
INSDC first public
2024-07-14T23:02:23.190Z
INSDC last update
SRS21992890
INSDC secondary accession
live
INSDC status
MIMS.me
NCBI submission model
MIGS/MIMS/MIMARKS.soil
NCBI submission model
MIMS.me.soil.6.0
NCBI submission package
SRS21992890
SRA accession
3 mg/kg
ammonium_nitrogen_wt
meth_2.1 (https://research.csiro.au/ambsm/)
ammonium_nitrogen_wt_meth
free living
biotic_relationship
0.3 mg/kg
boron_hot_cacl2
meth_2.1 (https://research.csiro.au/ambsm/)
boron_hot_cacl2_meth
20.3 %
clay
meth_2.1 (https://research.csiro.au/ambsm/)
clay_meth
49.16 %
coarse_sand
meth_2.1 (https://research.csiro.au/ambsm/)
coarse_sand_meth
2020-03-25T08:00:00Z
collection_date
DKGR
color
meth_2.1 (https://research.csiro.au/ambsm/)
color_meth
0.041 dS/m
conductivity
meth_2.1 (https://research.csiro.au/ambsm/)
conductivity_meth
Not provided
date_since_change_in_land_use
0.2 m - 0.4 m
depth
Keywords: GSC:MIxS;MIMS:6.0
description
0.27 mg/kg
dtpa_copper
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_copper_meth
55.1 mg/kg
dtpa_iron
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_iron_meth
0.94 mg/kg
dtpa_manganese
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_manganese_meth
0.91 mg/kg
dtpa_zinc
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_zinc_meth
10 m
elev
3 Production from Dryland Agriculture and Plantations
env_broad_scale
3.3.5 Sugar
env_local_scale
Soil [ENVO_00001998]
env_medium
1.45 meq/100g
exc_aluminium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_aluminium_meth
1.2 meq/100g
exc_calcium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_calcium_meth
0.07 meq/100g
exc_magnesium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_magnesium_meth
0.08 meq/100g
exc_potassium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_potassium_meth
0.05 meq/100g
exc_sodium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_sodium_meth
Not provided
extreme_event
18.31 %
fine_sand
meth_2.1 (https://research.csiro.au/ambsm/)
fine_sand_meth
Not provided
fire
Not provided
flooding
Australian Microbiome Initiative; CRCPFIVE000015
funding_agency
Tropical (wet)
general_env_feature
Australia:Queensland [GAZ_00002792]
geo_loc_name
5 %
gravel
meth_2.1 (https://research.csiro.au/ambsm/)
gravel_meth
Not provided
horizon
Not provided
immediate_previous_land_use
102.100.100/139658_0.2
isolate
soil
isolation_source
17.52448 S 146.02815 E
lat_lon
Dermosol
local_class
meth_2.27 (https://research.csiro.au/ambsm/)
local_class_meth
410658
ncbi_txid
2 mg/kg
nitrate_nitrogen
meth_2.1 (https://research.csiro.au/ambsm/)
nitrate_nitrogen_meth
Not provided
notes
meth_3.1.1 (https://research.csiro.au/ambsm/)
nucl_acid_ext
2.71 %
organic_carbon
meth_2.1 (https://research.csiro.au/ambsm/)
organic_carbon_meth
soil metagenome
http://purl.obolibrary.org/obo/NCBITaxon_410658
organism
4.4
ph
meth_2.1 (https://research.csiro.au/ambsm/)
ph_meth
5.2
ph_solid_h2o
meth_2.1 (https://research.csiro.au/ambsm/)
ph_solid_h2o_meth
13 mg/kg
phosphorus_colwell
meth_2.1 (https://research.csiro.au/ambsm/)
phosphorus_colwell_meth
57 mg/kg
potassium_colwell
meth_2.1 (https://research.csiro.au/ambsm/)
potassium_colwell_meth
Not provided
profile_position
meth_1.1 (https://research.csiro.au/ambsm/)
samp_collect_device
meth_1.1 (https://research.csiro.au/ambsm/)
samp_mat_process
Minka Ibanez
sample_attribution
102.100.100/139658
sample_id
sugarcane farm
sample_site_location_description
C. Paungfoo-Lonhienne
sample_submitter
Soil
sample_type
67.47 %
sand
meth_2.1 (https://research.csiro.au/ambsm/)
sand_meth
12.24 %
silt
meth_2.1 (https://research.csiro.au/ambsm/)
silt_meth
Not provided
slope_aspect
Not provided
slope_gradient
http://hdl.handle.net/102.100.100/139658
source_mat_id
meth_1.1 (https://research.csiro.au/ambsm/)
store_cond
11.9 mg/kg
sulphur
meth_2.1 (https://research.csiro.au/ambsm/)
sulphur_meth
Not provided
synonyms
Not provided
temp
Not provided
temp_meth
3.0
texture
meth_2.1 (https://research.csiro.au/ambsm/)
texture_meth
102.100.100/139658
title
Not provided
total_nitrogen
Not provided
total_nitrogen_meth
https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/139658
url
Not provided
vegetation_dom_grasses
Not provided
vegetation_dom_shrubs
Not provided
vegetation_dom_trees
Not provided
vegetation_total_cover
Cropland
vegetation_type
Not provided
water_content
Not provided
water_content_soil_meth