https://github.com/AusMicrobiome/contextualdb_doc/raw/4.2.0/db_schema_definitions/db_schema_definitions.xlsx
AustralianMicrobiome_metadata_defs_url
SAMN43038987
External Id
CSIRO
INSDC center name
2024-08-05T00:00:00Z
INSDC first public
2024-08-05T23:02:12.250Z
INSDC last update
SRS22254964
INSDC secondary accession
live
INSDC status
MIMS.me
NCBI submission model
MIGS/MIMS/MIMARKS.soil
NCBI submission model
MIMS.me.soil.6.0
NCBI submission package
SRS22254964
SRA accession
3 mg/kg
ammonium_nitrogen_wt
meth_2.1 (https://research.csiro.au/ambsm/)
ammonium_nitrogen_wt_meth
free living
biotic_relationship
0.4 mg/kg
boron_hot_cacl2
meth_2.1 (https://research.csiro.au/ambsm/)
boron_hot_cacl2_meth
7.73 %
clay
meth_2.1 (https://research.csiro.au/ambsm/)
clay_meth
83.71 %
coarse_sand
meth_2.1 (https://research.csiro.au/ambsm/)
coarse_sand_meth
2019-10-28T10:00:00Z
collection_date
GR
color
meth_2.1 (https://research.csiro.au/ambsm/)
color_meth
0.069 dS/m
conductivity
meth_2.1 (https://research.csiro.au/ambsm/)
conductivity_meth
Not provided
date_since_change_in_land_use
0 m - 0.1 m
depth
Keywords: GSC:MIxS;MIMS:6.0
description
0.24 mg/kg
dtpa_copper
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_copper_meth
26.8 mg/kg
dtpa_iron
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_iron_meth
21.34 mg/kg
dtpa_manganese
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_manganese_meth
1.15 mg/kg
dtpa_zinc
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_zinc_meth
102 m
elev
1 Conservation and Natural Environments
env_broad_scale
1.1 Nature conservation
env_local_scale
Soil [ENVO_00001998]
env_medium
0.04 meq/100g
exc_aluminium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_aluminium_meth
3.66 meq/100g
exc_calcium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_calcium_meth
0.93 meq/100g
exc_magnesium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_magnesium_meth
0.14 meq/100g
exc_potassium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_potassium_meth
0.39 meq/100g
exc_sodium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_sodium_meth
6.6 %
fine_sand
meth_2.1 (https://research.csiro.au/ambsm/)
fine_sand_meth
Not provided
fire
Not provided
funding_agency
Semi arid
general_env_feature
Australia:Victoria [GAZ_00002786]
geo_loc_name
0 %
gravel
meth_2.1 (https://research.csiro.au/ambsm/)
gravel_meth
Not provided
horizon
Not provided
immediate_previous_land_use
102.100.100/138511_0
isolate
soil
isolation_source
35.51706 S 142.02097 E
lat_lon
Calcarosol
local_class
meth_2.27 (https://research.csiro.au/ambsm/)
local_class_meth
410658
ncbi_txid
below detection limit
nitrate_nitrogen
meth_2.1 (https://research.csiro.au/ambsm/)
nitrate_nitrogen_meth
geo_loc_name: state/territory values derived from lat_lon using Nominatim
notes
Not provided
nucl_acid_ext
1.11 %
organic_carbon
meth_2.1 (https://research.csiro.au/ambsm/)
organic_carbon_meth
soil metagenome
http://purl.obolibrary.org/obo/NCBITaxon_410658
organism
5.4
ph
meth_2.1 (https://research.csiro.au/ambsm/)
ph_meth
6.6
ph_solid_h2o
meth_2.1 (https://research.csiro.au/ambsm/)
ph_solid_h2o_meth
4 mg/kg
phosphorus_colwell
meth_2.1 (https://research.csiro.au/ambsm/)
phosphorus_colwell_meth
66 mg/kg
potassium_colwell
meth_2.1 (https://research.csiro.au/ambsm/)
potassium_colwell_meth
Not provided
profile_position
Not provided
samp_collect_device
Not provided
samp_mat_process
Not provided
sample_attribution
102.100.100/138511
sample_id
BBLDSS1
sample_site_location_description
bissett
sample_submitter
Soil
sample_type
90.31 %
sand
meth_2.1 (https://research.csiro.au/ambsm/)
sand_meth
1.96 %
silt
meth_2.1 (https://research.csiro.au/ambsm/)
silt_meth
NE direction_or_degrees
slope_aspect
0 %
slope_gradient
http://hdl.handle.net/102.100.100/138511
source_mat_id
Not provided
store_cond
4 mg/kg
sulphur
meth_2.1 (https://research.csiro.au/ambsm/)
sulphur_meth
Not provided
temp
Not provided
temp_meth
1.5
texture
meth_2.1 (https://research.csiro.au/ambsm/)
texture_meth
102.100.100/138511
title
0.06 mg/kg
total_nitrogen
meth_2.1 (https://research.csiro.au/ambsm/)
total_nitrogen_meth
https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/138511
url
Not provided
vegetation_dom_grasses
Not provided
vegetation_dom_shrubs
Not provided
vegetation_dom_trees
95 %
vegetation_total_cover
Woodland
vegetation_type
Not provided
water_content
Not provided
water_content_soil_meth