https://github.com/AusMicrobiome/contextualdb_doc/raw/4.2.0/db_schema_definitions/db_schema_definitions.xlsx
AustralianMicrobiome_metadata_defs_url
SAMN43038958
External Id
CSIRO
INSDC center name
2024-08-05T00:00:00Z
INSDC first public
2024-08-06T00:00:27.070Z
INSDC last update
SRS22255079
INSDC secondary accession
live
INSDC status
MIMS.me
NCBI submission model
MIGS/MIMS/MIMARKS.soil
NCBI submission model
MIMS.me.soil.6.0
NCBI submission package
SRS22255079
SRA accession
3 mg/kg
ammonium_nitrogen_wt
meth_2.1 (https://research.csiro.au/ambsm/)
ammonium_nitrogen_wt_meth
free living
biotic_relationship
0.51 mg/kg
boron_hot_cacl2
meth_2.1 (https://research.csiro.au/ambsm/)
boron_hot_cacl2_meth
31.9 %
clay
meth_2.1 (https://research.csiro.au/ambsm/)
clay_meth
33.6 %
coarse_sand
meth_2.1 (https://research.csiro.au/ambsm/)
coarse_sand_meth
2019-11-06T23:00:00Z
collection_date
GRBR
color
Not provided
color_meth
0.193 dS/m
conductivity
meth_2.1 (https://research.csiro.au/ambsm/)
conductivity_meth
Not provided
date_since_change_in_land_use
0 m - 0.1 m
depth
Keywords: GSC:MIxS;MIMS:6.0
description
5.92 mg/kg
dtpa_copper
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_copper_meth
87.9 mg/kg
dtpa_iron
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_iron_meth
15.49 mg/kg
dtpa_manganese
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_manganese_meth
31.15 mg/kg
dtpa_zinc
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_zinc_meth
133 m
elev
5 Intensive Uses
env_broad_scale
5.4.1 Urban residential
env_local_scale
Soil [ENVO_00001998]
env_medium
0.05 meq/100g
exc_aluminium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_aluminium_meth
21.73 meq/100g
exc_calcium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_calcium_meth
6.51 meq/100g
exc_magnesium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_magnesium_meth
1.79 meq/100g
exc_potassium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_potassium_meth
0.27 meq/100g
exc_sodium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_sodium_meth
26.5 %
fine_sand
meth_2.1 (https://research.csiro.au/ambsm/)
fine_sand_meth
Not provided
fire
Not provided
funding_agency
Temperate
general_env_feature
Australia:Tasmania [GAZ_00007396]
geo_loc_name
0 %
gravel
meth_2.1 (https://research.csiro.au/ambsm/)
gravel_meth
A horizon
horizon
Not provided
immediate_previous_land_use
102.100.100/138327_0
isolate
soil
isolation_source
42.898545 S 147.306201 E
lat_lon
Vertosol
local_class
meth_2.27 (https://research.csiro.au/ambsm/)
local_class_meth
410658
ncbi_txid
25 mg/kg
nitrate_nitrogen
meth_2.1 (https://research.csiro.au/ambsm/)
nitrate_nitrogen_meth
backyard in 2500 - 3000 range
notes
meth_3.1.1 (https://research.csiro.au/ambsm/)
nucl_acid_ext
4.18 %
organic_carbon
meth_2.1 (https://research.csiro.au/ambsm/)
organic_carbon_meth
soil metagenome
http://purl.obolibrary.org/obo/NCBITaxon_410658
organism
5.9
ph
meth_2.1 (https://research.csiro.au/ambsm/)
ph_meth
6.6
ph_solid_h2o
meth_2.1 (https://research.csiro.au/ambsm/)
ph_solid_h2o_meth
225 mg/kg
phosphorus_colwell
meth_2.1 (https://research.csiro.au/ambsm/)
phosphorus_colwell_meth
998 mg/kg
potassium_colwell
meth_2.1 (https://research.csiro.au/ambsm/)
potassium_colwell_meth
Not provided
profile_position
meth_1.1 (https://research.csiro.au/ambsm/)
samp_collect_device
meth_1.2 (https://research.csiro.au/ambsm/)
samp_mat_process
University of Tasmania
sample_attribution
102.100.100/138327
sample_id
Not provided
sample_site_location_description
Penelope Jones/Emily Flies
sample_submitter
Soil
sample_type
60.1 %
sand
meth_2.1 (https://research.csiro.au/ambsm/)
sand_meth
8 %
silt
meth_2.1 (https://research.csiro.au/ambsm/)
silt_meth
Not provided
slope_aspect
Not provided
slope_gradient
http://hdl.handle.net/102.100.100/138327
source_mat_id
frozen
store_cond
7.7 mg/kg
sulphur
meth_2.1 (https://research.csiro.au/ambsm/)
sulphur_meth
9 degC
temp
Not provided
temp_meth
1.5
texture
meth_2.1 (https://research.csiro.au/ambsm/)
texture_meth
102.100.100/138327
title
Not provided
total_nitrogen
Not provided
total_nitrogen_meth
https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/138327
url
Not provided
vegetation_dom_grasses
Not provided
vegetation_dom_shrubs
Not provided
vegetation_dom_trees
Not provided
vegetation_total_cover
Grassland
vegetation_type
Not provided
water_content
Not provided
water_content_soil_meth