https://github.com/AusMicrobiome/contextualdb_doc/raw/4.2.0/db_schema_definitions/db_schema_definitions.xlsx
AustralianMicrobiome_metadata_defs_url
SAMN43039473
External Id
CSIRO
INSDC center name
2024-08-05T00:00:00Z
INSDC first public
2024-08-06T00:40:50.267Z
INSDC last update
SRS22255158
INSDC secondary accession
live
INSDC status
MIMS.me
NCBI submission model
MIGS/MIMS/MIMARKS.soil
NCBI submission model
MIMS.me.soil.6.0
NCBI submission package
SRS22255158
SRA accession
3 mg/kg
ammonium_nitrogen_wt
meth_2.1 (https://research.csiro.au/ambsm/)
ammonium_nitrogen_wt_meth
free living
biotic_relationship
5.99 mg/kg
boron_hot_cacl2
meth_2.1 (https://research.csiro.au/ambsm/)
boron_hot_cacl2_meth
11.44 %
clay
meth_2.1 (https://research.csiro.au/ambsm/)
clay_meth
69.82 %
coarse_sand
meth_2.1 (https://research.csiro.au/ambsm/)
coarse_sand_meth
2019-10-28T23:00:00Z
collection_date
GR
color
meth_2.1 (https://research.csiro.au/ambsm/)
color_meth
3.257 dS/m
conductivity
meth_2.1 (https://research.csiro.au/ambsm/)
conductivity_meth
0 m - 0.1 m
depth
Keywords: GSC:MIxS;MIMS:6.0
description
0.36 mg/kg
dtpa_copper
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_copper_meth
18.2 mg/kg
dtpa_iron
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_iron_meth
1.53 mg/kg
dtpa_manganese
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_manganese_meth
0.64 mg/kg
dtpa_zinc
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_zinc_meth
85 m
elev
1 Conservation and Natural Environments
env_broad_scale
1.1 Nature conservation
env_local_scale
Soil [ENVO_00001998]
env_medium
0.05 meq/100g
exc_aluminium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_aluminium_meth
5.04 meq/100g
exc_calcium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_calcium_meth
3.06 meq/100g
exc_magnesium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_magnesium_meth
0.48 meq/100g
exc_potassium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_potassium_meth
12.31 meq/100g
exc_sodium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_sodium_meth
16.82 %
fine_sand
meth_2.1 (https://research.csiro.au/ambsm/)
fine_sand_meth
Semi arid
general_env_feature
Australia:Victoria [GAZ_00002786]
geo_loc_name
0 %
gravel
meth_2.1 (https://research.csiro.au/ambsm/)
gravel_meth
102.100.100/138515_0
isolate
soil
isolation_source
36.40655 S 141.96059 E
lat_lon
Sodosol
local_class
meth_2.27 (https://research.csiro.au/ambsm/)
local_class_meth
410658
ncbi_txid
below detection limit
nitrate_nitrogen
meth_2.1 (https://research.csiro.au/ambsm/)
nitrate_nitrogen_meth
Lake shore | geo_loc_name: state/territory values derived from lat_lon using Nominatim
notes
0.53 %
organic_carbon
meth_2.1 (https://research.csiro.au/ambsm/)
organic_carbon_meth
soil metagenome
http://purl.obolibrary.org/obo/NCBITaxon_410658
organism
8.3
ph
meth_2.1 (https://research.csiro.au/ambsm/)
ph_meth
8.8
ph_solid_h2o
meth_2.1 (https://research.csiro.au/ambsm/)
ph_solid_h2o_meth
8 mg/kg
phosphorus_colwell
meth_2.1 (https://research.csiro.au/ambsm/)
phosphorus_colwell_meth
214 mg/kg
potassium_colwell
meth_2.1 (https://research.csiro.au/ambsm/)
potassium_colwell_meth
102.100.100/138515
sample_id
pink lake
sample_site_location_description
bissett
sample_submitter
Soil
sample_type
86.64 %
sand
meth_2.1 (https://research.csiro.au/ambsm/)
sand_meth
1.92 %
silt
meth_2.1 (https://research.csiro.au/ambsm/)
silt_meth
0 %
slope_gradient
http://hdl.handle.net/102.100.100/138515
source_mat_id
507.9 mg/kg
sulphur
meth_2.1 (https://research.csiro.au/ambsm/)
sulphur_meth
1.5
texture
meth_2.1 (https://research.csiro.au/ambsm/)
texture_meth
102.100.100/138515
title
0.05 mg/kg
total_nitrogen
meth_2.1 (https://research.csiro.au/ambsm/)
total_nitrogen_meth
https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/138515
url
85 %
vegetation_total_cover
Heathland
vegetation_type