https://github.com/AusMicrobiome/contextualdb_doc/raw/4.2.0/db_schema_definitions/db_schema_definitions.xlsx
AustralianMicrobiome_metadata_defs_url
SAMN43039056
External Id
CSIRO
INSDC center name
2024-08-05T00:00:00Z
INSDC first public
2024-08-05T23:41:37.597Z
INSDC last update
SRS22255042
INSDC secondary accession
live
INSDC status
MIMS.me
NCBI submission model
MIGS/MIMS/MIMARKS.soil
NCBI submission model
MIMS.me.soil.6.0
NCBI submission package
SRS22255042
SRA accession
5 mg/kg
ammonium_nitrogen_wt
meth_2.1 (https://research.csiro.au/ambsm/)
ammonium_nitrogen_wt_meth
free living
biotic_relationship
0.67 mg/kg
boron_hot_cacl2
meth_2.1 (https://research.csiro.au/ambsm/)
boron_hot_cacl2_meth
16.13 %
clay
meth_2.1 (https://research.csiro.au/ambsm/)
clay_meth
49.76 %
coarse_sand
meth_2.1 (https://research.csiro.au/ambsm/)
coarse_sand_meth
2020-04-08T23:43:00Z
collection_date
BRBK
color
Not provided
color_meth
0.053 dS/m
conductivity
meth_2.1 (https://research.csiro.au/ambsm/)
conductivity_meth
Not provided
date_since_change_in_land_use
0 m - 0.1 m
depth
Keywords: GSC:MIxS;MIMS:6.0
description
0.41 mg/kg
dtpa_copper
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_copper_meth
250.9 mg/kg
dtpa_iron
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_iron_meth
3.04 mg/kg
dtpa_manganese
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_manganese_meth
8.41 mg/kg
dtpa_zinc
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_zinc_meth
348 m
elev
1 Conservation and Natural Environments
env_broad_scale
1.2.2 Surface water supply
env_local_scale
Soil [ENVO_00001998]
env_medium
0.28 meq/100g
exc_aluminium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_aluminium_meth
3.7 meq/100g
exc_calcium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_calcium_meth
0.98 meq/100g
exc_magnesium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_magnesium_meth
0.51 meq/100g
exc_potassium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_potassium_meth
0.22 meq/100g
exc_sodium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_sodium_meth
26.56 %
fine_sand
meth_2.1 (https://research.csiro.au/ambsm/)
fine_sand_meth
Not provided
fire
Not provided
funding_agency
Temperate
general_env_feature
Australia:South Australia [GAZ_00002791]
geo_loc_name
25-30 %
gravel
meth_2.1 (https://research.csiro.au/ambsm/)
gravel_meth
A horizon
horizon
3.2.1 Native/exotic pasture mosaic
immediate_previous_land_use
102.100.100/140234_0
isolate
soil
isolation_source
35.085733 S 138.659439 E
lat_lon
Chromosols
local_class
meth_2.27 (https://research.csiro.au/ambsm/)
local_class_meth
410658
ncbi_txid
18 mg/kg
nitrate_nitrogen
meth_2.1 (https://research.csiro.au/ambsm/)
nitrate_nitrogen_meth
Submitted value={profile_position:Summit/ridge}|Submitted value={profile_position:summit}
notes
meth_3.1.1 (https://research.csiro.au/ambsm/)
nucl_acid_ext
2.81 %
organic_carbon
meth_2.1 (https://research.csiro.au/ambsm/)
organic_carbon_meth
soil metagenome
http://purl.obolibrary.org/obo/NCBITaxon_410658
organism
4.5
ph
meth_2.1 (https://research.csiro.au/ambsm/)
ph_meth
5.8
ph_solid_h2o
meth_2.1 (https://research.csiro.au/ambsm/)
ph_solid_h2o_meth
20 mg/kg
phosphorus_colwell
meth_2.1 (https://research.csiro.au/ambsm/)
phosphorus_colwell_meth
251 mg/kg
potassium_colwell
meth_2.1 (https://research.csiro.au/ambsm/)
potassium_colwell_meth
summit
profile_position
meth_1.1 (https://research.csiro.au/ambsm/)
samp_collect_device
Not provided
samp_mat_process
Martin Breed
sample_attribution
102.100.100/140234
sample_id
Mount Bold
sample_site_location_description
Emma Peters
sample_submitter
Soil
sample_type
76.32 %
sand
meth_2.1 (https://research.csiro.au/ambsm/)
sand_meth
7.55 %
silt
meth_2.1 (https://research.csiro.au/ambsm/)
silt_meth
SW direction_or_degrees
slope_aspect
3 %
slope_gradient
http://hdl.handle.net/102.100.100/140234
source_mat_id
frozen @ -20c
store_cond
3.7 mg/kg
sulphur
meth_2.1 (https://research.csiro.au/ambsm/)
sulphur_meth
11.6 degC
temp
BOM data
temp_meth
2.0
texture
meth_2.1 (https://research.csiro.au/ambsm/)
texture_meth
102.100.100/140234
title
Not provided
total_nitrogen
Not provided
total_nitrogen_meth
https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/140234
url
90 %
vegetation_dom_grasses
Not provided
vegetation_dom_shrubs
0 %
vegetation_dom_trees
90 %
vegetation_total_cover
Woodland
vegetation_type
17.34 %
water_content
meth_2.1 (https://research.csiro.au/ambsm/)
water_content_soil_meth