https://github.com/AusMicrobiome/contextualdb_doc/raw/4.2.0/db_schema_definitions/db_schema_definitions.xlsx
AustralianMicrobiome_metadata_defs_url
SAMN43039055
External Id
CSIRO
INSDC center name
2024-08-05T00:00:00Z
INSDC first public
2024-08-05T23:01:25.713Z
INSDC last update
SRS22254929
INSDC secondary accession
live
INSDC status
MIMS.me
NCBI submission model
MIGS/MIMS/MIMARKS.soil
NCBI submission model
MIMS.me.soil.6.0
NCBI submission package
SRS22254929
SRA accession
2 mg/kg
ammonium_nitrogen_wt
meth_2.1 (https://research.csiro.au/ambsm/)
ammonium_nitrogen_wt_meth
free living
biotic_relationship
0.45 mg/kg
boron_hot_cacl2
meth_2.1 (https://research.csiro.au/ambsm/)
boron_hot_cacl2_meth
14.16 %
clay
meth_2.1 (https://research.csiro.au/ambsm/)
clay_meth
54.07 %
coarse_sand
meth_2.1 (https://research.csiro.au/ambsm/)
coarse_sand_meth
2020-04-08T23:30:00Z
collection_date
GRBR
color
Not provided
color_meth
0.059 dS/m
conductivity
meth_2.1 (https://research.csiro.au/ambsm/)
conductivity_meth
Not provided
date_since_change_in_land_use
0.2 m - 0.3 m
depth
Keywords: GSC:MIxS;MIMS:6.0
description
0.5 mg/kg
dtpa_copper
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_copper_meth
128.5 mg/kg
dtpa_iron
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_iron_meth
0.87 mg/kg
dtpa_manganese
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_manganese_meth
0.74 mg/kg
dtpa_zinc
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_zinc_meth
349 m
elev
1 Conservation and Natural Environments
env_broad_scale
1.2.2 Surface water supply
env_local_scale
Soil [ENVO_00001998]
env_medium
0.21 meq/100g
exc_aluminium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_aluminium_meth
2.19 meq/100g
exc_calcium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_calcium_meth
0.91 meq/100g
exc_magnesium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_magnesium_meth
0.16 meq/100g
exc_potassium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_potassium_meth
0.11 meq/100g
exc_sodium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_sodium_meth
22.63 %
fine_sand
meth_2.1 (https://research.csiro.au/ambsm/)
fine_sand_meth
Not provided
fire
Not provided
funding_agency
Temperate
general_env_feature
Australia:South Australia [GAZ_00002791]
geo_loc_name
5 %
gravel
meth_2.1 (https://research.csiro.au/ambsm/)
gravel_meth
A horizon
horizon
3.2.1 Native/exotic pasture mosaic
immediate_previous_land_use
102.100.100/140233_0.2
isolate
soil
isolation_source
35.085429 S 138.659129 E
lat_lon
Chromosols
local_class
meth_2.27 (https://research.csiro.au/ambsm/)
local_class_meth
410658
ncbi_txid
14 mg/kg
nitrate_nitrogen
meth_2.1 (https://research.csiro.au/ambsm/)
nitrate_nitrogen_meth
Submitted value={profile_position:Summit/ridge}|Submitted value={profile_position:summit}
notes
meth_3.1.1 (https://research.csiro.au/ambsm/)
nucl_acid_ext
0.87 %
organic_carbon
meth_2.1 (https://research.csiro.au/ambsm/)
organic_carbon_meth
soil metagenome
http://purl.obolibrary.org/obo/NCBITaxon_410658
organism
4.6
ph
meth_2.1 (https://research.csiro.au/ambsm/)
ph_meth
5.7
ph_solid_h2o
meth_2.1 (https://research.csiro.au/ambsm/)
ph_solid_h2o_meth
30 mg/kg
phosphorus_colwell
meth_2.1 (https://research.csiro.au/ambsm/)
phosphorus_colwell_meth
77 mg/kg
potassium_colwell
meth_2.1 (https://research.csiro.au/ambsm/)
potassium_colwell_meth
summit
profile_position
meth_1.1 (https://research.csiro.au/ambsm/)
samp_collect_device
Not provided
samp_mat_process
Martin Breed
sample_attribution
102.100.100/140233
sample_id
Mount Bold
sample_site_location_description
Emma Peters
sample_submitter
Soil
sample_type
76.7 %
sand
meth_2.1 (https://research.csiro.au/ambsm/)
sand_meth
9.13 %
silt
meth_2.1 (https://research.csiro.au/ambsm/)
silt_meth
S direction_or_degrees
slope_aspect
3 %
slope_gradient
http://hdl.handle.net/102.100.100/140233
source_mat_id
frozen @ -20c
store_cond
1.2 mg/kg
sulphur
meth_2.1 (https://research.csiro.au/ambsm/)
sulphur_meth
10.4 degC
temp
BOM data
temp_meth
2.0
texture
meth_2.1 (https://research.csiro.au/ambsm/)
texture_meth
102.100.100/140233
title
Not provided
total_nitrogen
Not provided
total_nitrogen_meth
https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/140233
url
90 %
vegetation_dom_grasses
Not provided
vegetation_dom_shrubs
0 %
vegetation_dom_trees
90 %
vegetation_total_cover
Woodland
vegetation_type
10.35 %
water_content
meth_2.1 (https://research.csiro.au/ambsm/)
water_content_soil_meth