https://github.com/AusMicrobiome/contextualdb_doc/raw/4.2.0/db_schema_definitions/db_schema_definitions.xlsx
AustralianMicrobiome_metadata_defs_url
SAMN43039368
External Id
CSIRO
INSDC center name
2024-08-05T00:00:00Z
INSDC first public
2024-08-05T22:35:35.813Z
INSDC last update
SRS22254526
INSDC secondary accession
live
INSDC status
MIMS.me
NCBI submission model
MIGS/MIMS/MIMARKS.soil
NCBI submission model
MIMS.me.soil.6.0
NCBI submission package
SRS22254526
SRA accession
3 mg/kg
ammonium_nitrogen_wt
meth_2.1 (https://research.csiro.au/ambsm/)
ammonium_nitrogen_wt_meth
free living
biotic_relationship
2.97 %
clay
meth_2.1 (https://research.csiro.au/ambsm/)
clay_meth
91.85 %
coarse_sand
meth_2.1 (https://research.csiro.au/ambsm/)
coarse_sand_meth
2017-08-30
collection_date
LTGR
color
0.019 dS/m
conductivity
meth_2.1 (https://research.csiro.au/ambsm/)
conductivity_meth
0 m - 0.1 m
depth
Keywords: GSC:MIxS;MIMS:6.0
description
0.2 mg/kg
dtpa_copper
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_copper_meth
11.73 mg/kg
dtpa_iron
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_iron_meth
1.09 mg/kg
dtpa_manganese
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_manganese_meth
0.34 mg/kg
dtpa_zinc
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_zinc_meth
100 m
elev
1 Conservation and Natural Environments
env_broad_scale
1.2.1 Biodiversity
env_local_scale
Soil [ENVO_00001998]
env_medium
0.061 meq/100g
exc_aluminium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_aluminium_meth
1.48 meq/100g
exc_calcium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_calcium_meth
0.23 meq/100g
exc_magnesium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_magnesium_meth
0.04 meq/100g
exc_potassium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_potassium_meth
0.06 meq/100g
exc_sodium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_sodium_meth
post mining rehab
extreme_event
5.18 %
fine_sand
meth_2.1 (https://research.csiro.au/ambsm/)
fine_sand_meth
No recent fire
fire
No
flooding
Not provided
funding_agency
Temperate
general_env_feature
Australia:Western Australia [GAZ_00002789]
geo_loc_name
0 %
gravel
meth_2.1 (https://research.csiro.au/ambsm/)
gravel_meth
A horizon
horizon
1.2.1 Biodiversity
immediate_previous_land_use
102.100.100/42278_0
isolate
soil
isolation_source
30.67888 S 115.46777 E
lat_lon
Anthroposols
local_class
meth_2.27 (https://research.csiro.au/ambsm/)
local_class_meth
410658
ncbi_txid
below detection limit
nitrate_nitrogen
meth_2.1 (https://research.csiro.au/ambsm/)
nitrate_nitrogen_meth
Banksia woodland | geo_loc_name: state/territory values derived from lat_lon using Nominatim|Submitted value={profile_position:Valley floor}|Submitted value={profile_position:toeslope}
notes
meth_3.1.1 (https://research.csiro.au/ambsm/)
nucl_acid_ext
0.95 %
organic_carbon
meth_2.1 (https://research.csiro.au/ambsm/)
organic_carbon_meth
soil metagenome
http://purl.obolibrary.org/obo/NCBITaxon_410658
organism
4.9
ph
meth_2.1 (https://research.csiro.au/ambsm/)
ph_meth
6.1
ph_solid_h2o
meth_2.1 (https://research.csiro.au/ambsm/)
ph_solid_h2o_meth
below detection limit
phosphorus_colwell
meth_2.1 (https://research.csiro.au/ambsm/)
phosphorus_colwell_meth
19 mg/kg
potassium_colwell
meth_2.1 (https://research.csiro.au/ambsm/)
potassium_colwell_meth
toeslope
profile_position
Not provided
samp_mat_process
Bahram Mirfakhraei
sample_attribution
102.100.100/42278
sample_id
Cooljarloo (natural) <10 cm
sample_site_location_description
Bahram Mirfakhraei
sample_submitter
Soil
sample_type
97.03 %
sand
meth_2.1 (https://research.csiro.au/ambsm/)
sand_meth
below detection limit
silt
meth_2.1 (https://research.csiro.au/ambsm/)
silt_meth
0 %
slope_gradient
http://hdl.handle.net/102.100.100/42278
source_mat_id
Not provided
store_cond
2.2 mg/kg
sulphur
meth_2.1 (https://research.csiro.au/ambsm/)
sulphur_meth
Not provided
synonyms
1.0
texture
meth_2.1 (https://research.csiro.au/ambsm/)
texture_meth
102.100.100/42278
title
https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/42278
url
90 %
vegetation_total_cover
Woodland
vegetation_type