https://github.com/AusMicrobiome/contextualdb_doc/raw/4.2.0/db_schema_definitions/db_schema_definitions.xlsx
AustralianMicrobiome_metadata_defs_url
SAMN43039431
External Id
CSIRO
INSDC center name
2024-08-05T00:00:00Z
INSDC first public
2024-08-05T22:32:54.297Z
INSDC last update
SRS22254501
INSDC secondary accession
live
INSDC status
MIMS.me
NCBI submission model
MIGS/MIMS/MIMARKS.soil
NCBI submission model
MIMS.me.soil.6.0
NCBI submission package
SRS22254501
SRA accession
Not provided
ammonium_nitrogen_wt
Not provided
ammonium_nitrogen_wt_meth
free living
biotic_relationship
2.43 %
clay
meth_1.19 (https://research.csiro.au/ambsm/)
clay_meth
Not provided
coarse_sand
Not provided
coarse_sand_meth
2008-05-14
collection_date
Not provided
color
16.11 dS/m
conductivity
meth_1.19 (https://research.csiro.au/ambsm/)
conductivity_meth
0 m - 0.1 m
depth
Keywords: GSC:MIxS;MIMS:6.0
description
Not provided
dtpa_copper
Not provided
dtpa_copper_meth
Not provided
dtpa_iron
Not provided
dtpa_iron_meth
Not provided
dtpa_manganese
Not provided
dtpa_manganese_meth
Not provided
dtpa_zinc
Not provided
dtpa_zinc_meth
240 m
elev
6 Water
env_broad_scale
6.3 River
env_local_scale
Soil [ENVO_00001998]
env_medium
Not provided
exc_aluminium
Not provided
exc_aluminium_meth
Not provided
exc_calcium
Not provided
exc_calcium_meth
Not provided
exc_magnesium
Not provided
exc_magnesium_meth
Not provided
exc_potassium
Not provided
exc_potassium_meth
Not provided
exc_sodium
Not provided
exc_sodium_meth
Not provided
extreme_event
Not provided
fine_sand
Not provided
fine_sand_meth
Not provided
fire
Not provided
flooding
Geocsience Australia (GA)|Australian Microbiome
funding_agency
Not provided
general_env_feature
Australia:Northern Territory [GAZ_00002787]
geo_loc_name
Not provided
gravel
Not provided
gravel_meth
Not provided
horizon
Not provided
immediate_previous_land_use
102.100.100/42433_0
isolate
soil
isolation_source
22.9338 S 136.7838 E
lat_lon
Tenosol
local_class
meth_2.27 (https://research.csiro.au/ambsm/)
local_class_meth
410658
ncbi_txid
Not provided
nitrate_nitrogen
Not provided
nitrate_nitrogen_meth
geo_loc_name;sample_site_location_description derived from lat_lon using Nominatim|env_broad_scale;env_local_scale derived from Land use of Australia 250m_2015_16 raster package (DOI: 10.25814/7ygw-4d64) using lat_lon and converted from ALUMv8 to ALUMv7 vocab format
notes
meth_3.1.1 (https://research.csiro.au/ambsm/)
nucl_acid_ext
3.0526 %
organic_carbon
meth_1.19 (https://research.csiro.au/ambsm/)
organic_carbon_meth
soil metagenome
http://purl.obolibrary.org/obo/NCBITaxon_410658
organism
6.74
ph
meth_1.19 (https://research.csiro.au/ambsm/)
ph_meth
6.74
ph_solid_h2o
meth_2.1 (https://research.csiro.au/ambsm/)
ph_solid_h2o_meth
Not provided
phosphorus_colwell
Not provided
phosphorus_colwell_meth
Not provided
potassium_colwell
Not provided
potassium_colwell_meth
Not provided
profile_position
meth_1.19 (https://research.csiro.au/ambsm/)
samp_mat_process
Geoscience Australia (GA)|Australian Microbiome
sample_attribution
102.100.100/42433
sample_id
Anatye
sample_site_location_description
Not provided
sample_submitter
Soil
sample_type
90.48 %
sand
meth_1.19 (https://research.csiro.au/ambsm/)
sand_meth
7.09 %
silt
meth_1.19 (https://research.csiro.au/ambsm/)
silt_meth
Not provided
slope_gradient
http://hdl.handle.net/102.100.100/42433
source_mat_id
air-dried
store_cond
Not provided
sulphur
Not provided
sulphur_meth
GA_sampleID:2007190833001 Coarse
synonyms
Not provided
texture
Not provided
texture_meth
102.100.100/42433
title
https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/42433
url
Not provided
vegetation_total_cover
Not provided
vegetation_type