https://github.com/AusMicrobiome/contextualdb_doc/raw/4.2.0/db_schema_definitions/db_schema_definitions.xlsx
AustralianMicrobiome_metadata_defs_url
SAMN43039322
External Id
CSIRO
INSDC center name
2024-08-05T00:00:00Z
INSDC first public
2024-08-05T22:45:42.460Z
INSDC last update
SRS22254706
INSDC secondary accession
live
INSDC status
MIMS.me
NCBI submission model
MIGS/MIMS/MIMARKS.soil
NCBI submission model
MIMS.me.soil.6.0
NCBI submission package
SRS22254706
SRA accession
3 mg/kg
ammonium_nitrogen_wt
meth_2.1 (https://research.csiro.au/ambsm/)
ammonium_nitrogen_wt_meth
free living
biotic_relationship
0.21 mg/kg
boron_hot_cacl2
meth_2.1 (https://research.csiro.au/ambsm/)
boron_hot_cacl2_meth
below detection limit
clay
meth_2.1 (https://research.csiro.au/ambsm/)
clay_meth
96.61 %
coarse_sand
meth_2.1 (https://research.csiro.au/ambsm/)
coarse_sand_meth
2020-04-29T01:45:00Z
collection_date
GRBR
color
0.013 dS/m
conductivity
meth_2.1 (https://research.csiro.au/ambsm/)
conductivity_meth
0.1 m - 0.15 m
depth
Keywords: GSC:MIxS;MIMS:6.0
description
0.17 mg/kg
dtpa_copper
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_copper_meth
27.5 mg/kg
dtpa_iron
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_iron_meth
0.81 mg/kg
dtpa_manganese
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_manganese_meth
0.1 mg/kg
dtpa_zinc
meth_2.1 (https://research.csiro.au/ambsm/)
dtpa_zinc_meth
54.38689 m
elev
1 Conservation and Natural Environments
env_broad_scale
1.1.7 Other conserved area
env_local_scale
Soil [ENVO_00001998]
env_medium
0.11 meq/100g
exc_aluminium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_aluminium_meth
0.68 meq/100g
exc_calcium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_calcium_meth
0.25 meq/100g
exc_magnesium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_magnesium_meth
0.03 meq/100g
exc_potassium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_potassium_meth
0.05 meq/100g
exc_sodium
meth_2.1 (https://research.csiro.au/ambsm/)
exc_sodium_meth
2.45 %
fine_sand
meth_2.1 (https://research.csiro.au/ambsm/)
fine_sand_meth
2018-10-01
fire
ECU RTP Scholarship
funding_agency
Other (Mediterranean)
general_env_feature
Australia:Western Australia [GAZ_00002789]
geo_loc_name
0 %
gravel
meth_2.1 (https://research.csiro.au/ambsm/)
gravel_meth
A horizon
horizon
102.100.100/139518_0.1
isolate
soil
isolation_source
31.254608 S 115.52531 E
lat_lon
Tenosol
local_class
meth_2.27 (https://research.csiro.au/ambsm/)
local_class_meth
410658
ncbi_txid
below detection limit
nitrate_nitrogen
meth_2.1 (https://research.csiro.au/ambsm/)
nitrate_nitrogen_meth
meth_3.1.1 (https://research.csiro.au/ambsm/)
nucl_acid_ext
0.59 %
organic_carbon
meth_2.1 (https://research.csiro.au/ambsm/)
organic_carbon_meth
soil metagenome
http://purl.obolibrary.org/obo/NCBITaxon_410658
organism
4.7
ph
meth_2.1 (https://research.csiro.au/ambsm/)
ph_meth
6.2
ph_solid_h2o
meth_2.1 (https://research.csiro.au/ambsm/)
ph_solid_h2o_meth
below detection limit
phosphorus_colwell
meth_2.1 (https://research.csiro.au/ambsm/)
phosphorus_colwell_meth
below detection limit
potassium_colwell
meth_2.1 (https://research.csiro.au/ambsm/)
potassium_colwell_meth
meth_1.1 (https://research.csiro.au/ambsm/)
samp_collect_device
meth_2.1 (https://research.csiro.au/ambsm/)
samp_mat_process
Aaron Brace; Anna Hopkins; Joe Fontaine; Katinka Ruthrof; Ben Miller
sample_attribution
102.100.100/139518
sample_id
Moore river_State forest
sample_site_location_description
Aaron Brace
sample_submitter
Soil
sample_type
99.06 %
sand
meth_2.1 (https://research.csiro.au/ambsm/)
sand_meth
below detection limit
silt
meth_2.1 (https://research.csiro.au/ambsm/)
silt_meth
http://hdl.handle.net/102.100.100/139518
source_mat_id
meth_1.1 (https://research.csiro.au/ambsm/)
store_cond
1.5 mg/kg
sulphur
meth_2.1 (https://research.csiro.au/ambsm/)
sulphur_meth
15 degC
temp
meth_1.1 (https://research.csiro.au/ambsm/)
temp_meth
1
texture
meth_2.1 (https://research.csiro.au/ambsm/)
texture_meth
102.100.100/139518
title
https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/139518
url
Woodland
vegetation_type