SAMN43182595
External Id
Wageningen University & Research
INSDC center name
2024-09-16T00:00:00Z
INSDC first public
2024-09-16T04:22:23.670Z
INSDC last update
SRS22340126
INSDC secondary accession
live
INSDC status
MIGS.eu
NCBI submission model
MIGS.eu.6.0
NCBI submission package
SRS22340126
SRA accession
2023
collection_date
cv. Moneyberg x cv. Moneymaker
cultivar
Keywords: GSC:MIxS;MIGS:6.0
description
Individual plants were sampled by sampling size leaf pieces per plant. Genomic DNA (gDNA) was isolated from the pooled samples using the KingFisher Flex system. Target regions were enriched via PCR, and the resulting amplicons were barcoded and sequenced using the PacBio Sequel II platform.
design_description
Climate_chamber
env_broad_scale
Climate_chamber_fans
env_local_scale
general cultivation soil
env_medium
final_trimmed_1_D_12_x_1_4_11b.fq
filename
fastq
filetype
Netherlands
geo_loc_name
MinION
instrument_model
not_appliccable
isol_growth_condt
51.59 N 5.39 E
lat_lon
627
library_id
single
library_layout
PCR
library_selection
GENOMIC
library_source
AMPLICON
library_strategy
Solanum lycopersicum
http://purl.obolibrary.org/obo/NCBITaxon_4081
organism
OXFORD_NANOPORE
platform
ONT R10 sequencing data of F1 plants
title
MIGS Eukaryotic sample from Solanum lycopersicum
title