SAMN43182453
External Id
Wageningen University & Research
INSDC center name
2024-09-16T00:00:00Z
INSDC first public
2024-09-16T04:22:05.332Z
INSDC last update
SRS22339955
INSDC secondary accession
live
INSDC status
MIGS.eu
NCBI submission model
MIGS.eu.6.0
NCBI submission package
SRS22339955
SRA accession
2023
collection_date
cv. Moneyberg x cv. Moneymaker
cultivar
Keywords: GSC:MIxS;MIGS:6.0
description
Seedlings were sampled by excising 0.5 cm sections of the cotyledon. A total of 42 samples were pooled for each pool. Genomic DNA (gDNA) was isolated from the pooled samples using the KingFisher Flex system. Target regions were enriched via PCR, and the resulting amplicons were barcoded and sequenced using the PacBio Sequel II platform.
design_description
Climate_chamber
env_broad_scale
Climate_chamber_fans
env_local_scale
rockwool
env_medium
3_5_11.fq
filename
fastq
filetype
Netherlands
geo_loc_name
Sequel IIe
instrument_model
not_appliccable
isol_growth_condt
51.59 N 5.39 E
lat_lon
485
library_id
single
library_layout
PCR
library_selection
GENOMIC
library_source
AMPLICON
library_strategy
Solanum lycopersicum
http://purl.obolibrary.org/obo/NCBITaxon_4081
organism
PACBIO_SMRT
platform
PacBio Sequel II sequencing data of F1 seedlings
title
MIGS Eukaryotic sample from Solanum lycopersicum
title