characteristics.text: 2025-02-07
characteristics.characteristic: ENA first public
characteristics.text: ERC000047
characteristics.characteristic: ENA-CHECKLIST
characteristics.text: Centre for Genomic Epidemiology;National Food Institute;Technical University of Denmark (DTU);Denmark;Centre for Genomic Epidemiology National Food Institute Technical University of Denmark (DTU) Denmark DTU-GE
characteristics.characteristic: INSDC center name
characteristics.text: public
characteristics.characteristic: INSDC status
characteristics.text: ERS23136822
characteristics.characteristic: SRA accession
characteristics.text: DTU_2024_1025672_1_MG_Kigoma_Rural_39.bin.175
characteristics.characteristic: Submitter Id
characteristics.text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
characteristics.characteristic: assembly quality
characteristics.text: SPAdes v3.14.0
characteristics.characteristic: assembly software
characteristics.text: Abundance and Tetranucleotide frequency
characteristics.characteristic: binning parameters
characteristics.text: MetaBAT v2.12.1
characteristics.characteristic: binning software
characteristics.text: microbiome
characteristics.characteristic: broad-scale environmental context
characteristics.text: DTU-GE
characteristics.characteristic: broker name
characteristics.text: 2024-01-27
characteristics.characteristic: collection date
characteristics.text: 82.66
characteristics.unit: %
characteristics.characteristic: completeness score
characteristics.text: CheckM v1.0.18
characteristics.characteristic: completeness software
characteristics.text: 4.03
characteristics.unit: %
characteristics.characteristic: contamination score
characteristics.text: This sample represents a MAG derived from the metagenomic sample ERS22583753
characteristics.characteristic: description
characteristics.text: fecal material
characteristics.characteristic: environmental medium
characteristics.text: Tanzania
characteristics.characteristic: geographic location (country and/or sea)
characteristics.text: -4.893941
characteristics.unit: DD
characteristics.characteristic: geographic location (latitude)
characteristics.text: 29.673386
characteristics.unit: DD
characteristics.characteristic: geographic location (longitude)
characteristics.text: goat feces
characteristics.characteristic: isolation_source
characteristics.text: Rural
characteristics.characteristic: local environmental context
characteristics.text: goat gut metagenome
characteristics.characteristic: metagenomic source
characteristics.text: goat gut metagenome
characteristics.characteristic: organism
characteristics.text: The impact of environmental pollution on the gut microbiome of Tanzanian goats
characteristics.characteristic: project name
characteristics.text: ERS22583753
characteristics.characteristic: sample derived from
characteristics.text: goat gut metagenome
characteristics.characteristic: scientific_name
characteristics.text: multi-marker approach
characteristics.characteristic: taxonomic identity marker
characteristics.text: MAG from goat gut microbiome with the following gtdb taxonomic classification: d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Christensenellales;f__CAG-74;g__UBA11524;s__
characteristics.characteristic: title