characteristics.text: SAMN43663934
characteristics.characteristic: External Id
characteristics.text: University Laval
characteristics.characteristic: INSDC center name
characteristics.text: 2024-09-12T00:00:00Z
characteristics.characteristic: INSDC first public
characteristics.text: 2024-09-27T09:57:35.150Z
characteristics.characteristic: INSDC last update
characteristics.text: SRS22760516
characteristics.characteristic: INSDC secondary accession
characteristics.text: live
characteristics.characteristic: INSDC status
characteristics.text: Invertebrate
characteristics.characteristic: NCBI submission model
characteristics.text: Invertebrate.1.0
characteristics.characteristic: NCBI submission package
characteristics.text: SRS22760516
characteristics.characteristic: SRA accession
characteristics.text: 2023-08-31
characteristics.characteristic: collection_date
characteristics.text: This study presents the comprehensive characterization of the mitochondrial genome of the leafhopper species Empoasca fabae (Harris 1841) using Illumina sequencing technology. Through a contig-level assembly of 140 million paired-end reads with SPAdes (v.4.0.0), we isolated a mitochondrial contig spanning 14,873 base pairs and achieving 181x coverage. The base composition revealed A (38.8%), T (39.1%), C (11.7%), and G (10.4%). The annotated mitogenome includes 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), two ribosomal RNA genes (rRNAs), and features a distinctive, non-AT-rich D-loop region.
characteristics.characteristic: description
characteristics.text: Adult
characteristics.characteristic: dev_stage
characteristics.text: Canada
characteristics.characteristic: geo_loc_name
characteristics.text: E. fabae adults
characteristics.characteristic: isolate
characteristics.text: strawberry field
characteristics.characteristic: isolation_source
characteristics.text: 45.573333 N 73.062778 W
characteristics.characteristic: lat_lon
characteristics.text: Empoasca fabae
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/NCBITaxon_139595
characteristics.characteristic: organism
characteristics.text: pooled male and female
characteristics.characteristic: sex
characteristics.text: Whole insect
characteristics.characteristic: tissue
characteristics.text: Empoasca fabae complete mitogenome
characteristics.characteristic: title