2025-02-13
ENA first public
ERC000013
ENA-CHECKLIST
HCMR
INSDC center name
public
INSDC status
ERS22989245
SRA accession
EB
Submitter Id
anthropogenic environment [ENVO_01000313]
broad-scale environmental context
2023-09-27
collection date
Microbiome of sterile water used as a template for DNA extraction, analyzed by 16S rRNA sequencing
description
sterile water [ENVO_00005791]
environmental medium
7
experiment_pH
25
ºC
experiment_temperature
T704-T5A-EB_S409_L001
filename_basename
Greece
geographic location (country and/or sea)
35.330833
DD
geographic location (latitude)
25.281944
DD
geographic location (longitude)
Dual-indexing two-step PCR with Truseq adapters and diversity spacers in the primers
library construction method
1088
library reads sequenced
laboratory environment [ENVO_01001405]
local environmental context
ZymoResearch QuickDNA Microprep kit
nucleic acid extraction
free living
observed biotic relationship
metagenome
organism
MACCIMO: Multi-level Approaches to assess Climate Change Impact to Marine Organisms
project name
sterile water that was used as a template for DNA extraction
sample material processing
metagenome
scientific_name
Illumina (MiSeq)
seq_meth
16S rRNA
target gene
V3-V4
target subfragment
sterile water that was used as a template for DNA extraction
title