2025-02-13
ENA first public
ERC000013
ENA-CHECKLIST
HCMR
INSDC center name
public
INSDC status
ERS22989243
SRA accession
Tank3_1stel
Submitter Id
aquarium [ENVO_00002196]
broad-scale environmental context
2023-09-18
collection date
Microbiome of NACC aquarium water sample analyzed by 16SrRNA sequencing
description
liquid water [ENVO_00002008]
environmental medium
7.8
experiment_pH
30
ºC
experiment_temperature
T704-T5D-Tank3-1st-el_S412_L001
filename_basename
Greece
geographic location (country and/or sea)
35.331944
DD
geographic location (latitude)
25.282222
DD
geographic location (longitude)
Dual-indexing two-step PCR with Truseq adapters and diversity spacers in the primers
library construction method
449260
library reads sequenced
saline water aquarium [ENVO_00002197]
local environmental context
PowerWater Dneasy kit
nucleic acid extraction
free living
observed biotic relationship
aquarium metagenome
organism
MACCIMO: Multi-level Approaches to assess Climate Change Impact to Marine Organisms
project name
water from aquarium (temperature=30°C, pH =7.8) that was filtered through sterivex 0.22 μm
sample material processing
aquarium metagenome
scientific_name
Illumina (MiSeq)
seq_meth
16S rRNA
target gene
V3-V4
target subfragment
NACC aquarium water
title