SARS-CoV-2/Human/USA/VA-CDC-LC1123665/2024
External Id
SAMN44285290
External Id
CDC-OAMD
INSDC center name
2024-10-15T00:00:00Z
INSDC first public
2024-10-15T03:36:46.777Z
INSDC last update
SRS22905749
INSDC secondary accession
live
INSDC status
SARS-CoV-2/Human/USA/VA-CDC-LC1123665/2024
Isolate
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
SRS22905749
SRA accession
Laboratory Corporation of America
collected_by
2024-10-04
collection_date
Nasal Swabs
collection_device
Nasal Swabs
collection_method
N1 gene
diagnostic_gene_name_1
N2 gene
diagnostic_gene_name_2
RP gene
diagnostic_gene_name_3
23.604
diagnostic_pcr_Ct_value_1
22.096
diagnostic_pcr_Ct_value_2
36.432
diagnostic_pcr_Ct_value_3
Labcorp LDT
diagnostic_pcr_protocol_1
Labcorp LDT
diagnostic_pcr_protocol_2
Labcorp LDT
diagnostic_pcr_protocol_3
USA: Virginia
geo_loc_name
Homo sapiens
host
59
host_age
COVID-19
host_disease
Unknown
host_race
male
host_sex
Nasal Swabs
isolation_source
KP.3.1.1
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
baseline surveillance (random sampling)
purpose_of_sequencing
CDC Sars CoV2 Sequencing Baseline Constellation
title