SAMN44461866
External Id
G10K
INSDC center name
2024-10-26T00:00:00Z
INSDC first public
2024-10-29T06:46:13.858Z
INSDC last update
live
INSDC status
Model organism or animal
NCBI submission model
Model.organism.animal.1.0
NCBI submission package
SRS23821994
SRA accession
AGS 11-24
Source ID
University of Alaska Fairbanks: Anya Goropashnaya
biomaterial_provider
University of Alaska Fairbanks, Vadim Fedorov
collected_by
2011-11-16
collection_date
The Arctic ground squirrel (Urocitellus parryii) is a species of ground squirrel native to the Arctic and Subarctic of North America and Asia. It can be found in regions of Northern Canada ranging from the Arctic Circle to northern British Columbia, and down to the southern border of the Northwest Territories, as well as Alaska and Siberia (from Wikipedia entry). The sample was procured from the Pump Station No. 4 area of Northern Alaska by Vadim Fedorov and Anya Goropashnaya of the University of Alaska Fairbanks and coordinated by Trygve Bakken, Ed Lein, and Rebecca Hodge at the Allen Institute for Brain Science to generate a high-quality reference genome for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genome Lab (VGL) at the Rockefeller University, led by Erich D. Jarvis, Giulio Formenti, and Jennifer Balacco.
description
adult
dev_stage
USA: Pump Station No. 4 Area, Alaska
geo_loc_name
mUroPar1
isolate
68.42815 N 149.353 W
lat_lon
Urocitellus parryii
http://purl.obolibrary.org/obo/NCBITaxon_9999
organism
male
sex
-80oC
store_cond
muscle
tissue
Animal sample from Urocitellus parryii (Arctic ground squirrel) for VGP reference genome, mUroPar1
title
flash frozen
treatment