https://github.com/AusMicrobiome/contextualdb_doc/raw/4.2.0/db_schema_definitions/db_schema_definitions.xlsx
AustralianMicrobiome_metadata_defs_url
SAMN44625792
External Id
CSIRO
INSDC center name
2024-11-07T00:00:00Z
INSDC first public
2024-11-07T17:47:47.257Z
INSDC last update
SRS23145631
INSDC secondary accession
live
INSDC status
MIMS.me
NCBI submission model
MIGS/MIMS/MIMARKS.water
NCBI submission model
MIMS.me.water.6.0
NCBI submission package
SRS23145631
SRA accession
Not provided
alkalinity
Not provided
alkalinity_meth
Not provided
allo
Not provided
allo_meth
Not provided
alpha_beta_car
Not provided
alpha_beta_car_meth
28.5577208654132 μmol/L
ammonium
meth_2.1 (https://research.csiro.au/ambsm/)
ammonium_meth
Not provided
anth
Not provided
anth_meth
Not provided
asta
Not provided
asta_meth
127.85 mg/L
bicarbonate
meth_2.1 (https://research.csiro.au/ambsm/)
bicarbonate_meth
free living
biotic_relationship
Not provided
but_fuco
Not provided
but_fuco_meth
Not provided
cantha
Not provided
cantha_meth
0 mg/L
carbonate
meth_2.1 (https://research.csiro.au/ambsm/)
carbonate_meth
20062.5 mg/L
chloride
meth_2.1 (https://research.csiro.au/ambsm/)
chloride_meth
Not provided
chlorophyll_a
Not provided
chlorophyll_a_meth
Not provided
chlorophyll_b
Not provided
chlorophyll_b_meth
Not provided
chlorophyll_c1
Not provided
chlorophyll_c1_meth
Not provided
chlorophyll_c2
Not provided
chlorophyll_c2_meth
Not provided
chlorophyll_c3
Not provided
chlorophyll_c3_meth
Not provided
chlorophyll_ctd
Not provided
chlorophyll_ctd_meth
2021-03-16T02:30:00Z
collection_date
4.8578 S/m
conductivity_aqueous
meth_2.1 (https://research.csiro.au/ambsm/)
conductivity_aqueous_meth
Not provided
cphlide_a
Not provided
cphlide_a_meth
Not provided
density
Not provided
density_meth
0 m
depth
Keywords: GSC:MIxS;MIMS:6.0
description
Not provided
diadchr
Not provided
diadchr_meth
Not provided
diadino
Not provided
diadino_meth
Not provided
diato
Not provided
diato_meth
Not provided
dino
Not provided
dino_meth
Not provided
dv_cphl_a
Not provided
dv_cphl_a_and_cphl_a
Not provided
dv_cphl_a_and_cphl_a_meth
Not provided
dv_cphl_a_meth
Not provided
dv_cphl_b
Not provided
dv_cphl_b_and_cphl_b
Not provided
dv_cphl_b_and_cphl_b_meth
Not provided
dv_cphl_b_meth
Not provided
echin
Not provided
echin_meth
1 Conservation and Natural Environments
env_broad_scale
1.1 Nature conservation
env_local_scale
Sea water [ENVO_00002149]
env_medium
Not provided
fuco
Not provided
fuco_meth
Not provided
funding_agency
Marine - neritic (coastal off shore)
general_env_feature
Australia:Tasmania [GAZ_00007396]
geo_loc_name
Not provided
gyro
Not provided
gyro_meth
Not provided
hex_fuco
Not provided
hex_fuco_meth
4.59 mg/L
icp_te_boron
meth_2.1 (https://research.csiro.au/ambsm/)
icp_te_boron_meth
428.3 mg/L
icp_te_calcium
meth_2.1 (https://research.csiro.au/ambsm/)
icp_te_calcium_meth
below detection limit
icp_te_copper
meth_2.1 (https://research.csiro.au/ambsm/)
icp_te_copper_meth
below detection limit
icp_te_iron
meth_2.1 (https://research.csiro.au/ambsm/)
icp_te_iron_meth
below detection limit
icp_te_manganese
meth_2.1 (https://research.csiro.au/ambsm/)
icp_te_manganese_meth
below detection limit
icp_te_phosphorus
meth_2.1 (https://research.csiro.au/ambsm/)
icp_te_phosphorus_meth
934.4 mg/L
icp_te_sulfur
meth_2.1 (https://research.csiro.au/ambsm/)
icp_te_sulfur_meth
below detection limit
icp_te_zinc
meth_2.1 (https://research.csiro.au/ambsm/)
icp_te_zinc_meth
Not provided
imos_site_code
102.100.100/138540_0
isolate
Coastal water
isolation_source
Not provided
keto_hex_fuco
Not provided
keto_hex_fuco_meth
40.991777 S 147.064239 E
lat_lon
Not provided
lut
Not provided
lut_meth
Not provided
lyco
Not provided
lyco_meth
1335 mg/L
magnesium
meth_2.1 (https://research.csiro.au/ambsm/)
magnesium_meth
Not provided
mg_dvp
Not provided
mg_dvp_meth
408172
ncbi_txid
Not provided
neo
Not provided
neo_meth
Not provided
nitrate
Not provided
nitrate_meth
below detection limit
nitrate_nitrite
meth_2.1 (https://research.csiro.au/ambsm/)
nitrate_nitrite_meth
Not provided
nitrite
Not provided
nitrite_meth
Not provided
notes
Not provided
nrs_sample_code
Not provided
nrs_trip_code
meth_3.1.7 (https://research.csiro.au/ambsm/)
nucl_acid_ext
marine metagenome
http://purl.obolibrary.org/obo/NCBITaxon_408172
organism
Not provided
oxygen
Not provided
oxygen_ctd_vol
Not provided
oxygen_ctd_vol_meth
Not provided
oxygen_meth
Not provided
perid
Not provided
perid_meth
8.1
ph
meth_2.1 (https://research.csiro.au/ambsm/)
ph_meth
Not provided
phide_a
Not provided
phide_a_meth
Not provided
phosphate
Not provided
phosphate_meth
Not provided
phytin_a
Not provided
phytin_a_meth
Not provided
phytin_b
Not provided
phytin_b_meth
Not provided
picoeukaryotes
Not provided
picoeukaryotes_meth
401.9 mg/L
potassium
meth_2.1 (https://research.csiro.au/ambsm/)
potassium_meth
Not provided
pras
Not provided
pras_meth
Not provided
prochlorococcus
Not provided
prochlorococcus_meth
Not provided
pyrophide_a
Not provided
pyrophide_a_meth
Not provided
pyrophytin_a
Not provided
pyrophytin_a_meth
Not provided
salinity
Not provided
salinity_lab
Not provided
salinity_lab_meth
Not provided
salinity_meth
meth_1.22 (https://research.csiro.au/ambsm/)
samp_collect_device
Not provided
samp_mat_process
2 L
samp_size
2 L
samp_vol_we_dna_ext
Not provided
sample_attribution
102.100.100/138540
sample_id
Low Head
sample_site_location_description
Bissett
sample_submitter
Coastal water
sample_type
Not provided
sample_volume_notes
Not provided
secchi_depth
Not provided
secchi_depth_meth
Not provided
silicate
Not provided
silicate_meth
11440 mg/L
sodium
meth_2.1 (https://research.csiro.au/ambsm/)
sodium_meth
http://hdl.handle.net/102.100.100/138540
source_mat_id
Not provided
store_cond
Not provided
synechococcus
Not provided
synechococcus_meth
Not provided
temp
Not provided
temp_meth
102.100.100/138540
title
Not provided
total_co2
Not provided
total_co2_meth
Not provided
tss
Not provided
tss_meth
Not provided
turbidity
Not provided
turbidity_meth
https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/138540
url
Not provided
viola
Not provided
viola_meth
Not provided
zea
Not provided
zea_meth
Not provided
zooplankton_biomass
Not provided
zooplankton_biomass_meth