SAMN44826345
External Id
G10K
INSDC center name
2024-11-19T00:00:00Z
INSDC first public
2024-11-26T14:18:20.310Z
INSDC last update
SRS23366498
INSDC secondary accession
live
INSDC status
Model organism or animal
NCBI submission model
Model.organism.animal.1.0
NCBI submission package
SRS23366498
SRA accession
GN22812
Source ID
University of Florida: Gavin Naylor
biomaterial_provider
2017-06-18T00:00:00
birth_date
Okinawa Churaumi Aquarium
birth_location
Taketeru Tomita
collected_by
2021-10-25
collection_date
The Japanese sawshark (Pristiophorus japonicus) is a species of sawshark in the family Pristiophoridae. This shark has a long, narrow rostrum. Its first dorsal fin originates behind the tips of the pectoral fins, and its caudal fin is angled almost straight in line with the body. It is found in the northwest Pacific Ocean around Japan, Korea, Taiwan, and northern China over the sandy or muddy bottoms of the continental shelf at depths of 50 to 800 m (160 to 2,620 ft) (from Wikipedia entry). This sample of a male individual born at the Okinawa Churaumi Aquarium in Okinawa, Japan, was collected by Taketeru Tomita and coordinated by Gavin Naylor and Adrian Lee to generate transcriptomic data for a high-quality reference genome for the Vertebrate Genomes Project (VGP). Keiichi Sato of the Okinawa Churaumi Aquarium facilitated collection of the tissues. Sequencing and genome assembly were conducted at the Vertebrate Genome Lab (VGL) at the Rockefeller University, led by Erich D. Jarvis, Giulio Formenti, and Jennifer Balacco.
description
adult
dev_stage
Japan: Okinawa
geo_loc_name
sPriJap1
isolate
26.69439 N 127.87794 E
lat_lon
Pristiophorus japonicus
http://purl.obolibrary.org/obo/NCBITaxon_55135
organism
male
sex
-80oC
store_cond
tissues
tissue
Animal sample from Pristiophorus japonicus (Japanese sawshark) for VGP transcriptome, sPriJap1 - testes
title
Flash frozen
treatment