SAMN45129336
External Id
U.S. Food and Drug Administration
INSDC center name
2024-12-02T00:00:00Z
INSDC first public
2024-12-05T12:02:22.147Z
INSDC last update
SRS23449315
INSDC secondary accession
live
INSDC status
MIGS/MIMS/MIMARKS.food-farm_env
NCBI submission model
MIMS.me
NCBI submission model
MIMS.me.food-farm_env.6.0
NCBI submission package
SRS23449315
SRA accession
farm [ENVO_00000078]
adjacent_environment
none
biotic_regm
none
chem_administration
2021-02-03
collection_date
sterile scoop
collection_method
surface
depth
Metagenome of untreated dairy manure collected off the field the day after amendment. Sample replicate E.
description
not applicable
enrichment_protocol
anthropogenic terrestrial biome [ENVO_01000219]
env_broad_scale
farm [ENVO_00000078]
env_local_scale
animal manure [ENVO_00003031]
env_medium
not applicable
food_product_type
USA:Ohio
geo_loc_name
80%
humidity
not applicable
ifsac_category
untreated dairy manure amendment
isolation_source
40.7589 N 81.9535 W
lat_lon
feces metagenome
http://purl.obolibrary.org/obo/NCBITaxon_1861841
organism
research
purpose_of_sampling
from the crop-growing fields
rel_location
US FDA
repository
sterile scoop
samp_collect_device
natural environment specimen [GENEPIO_0001250]
samp_mat_type
manure sample was a composite of 5 subsamples taken from the field
samp_pooling
2L
samp_size
natural environment specimen [GENEPIO_0001250]
samp_source_mat_cat
4 degrees during transport; -20 until processing
samp_store_temp
5g
samp_vol_we_dna_ext
winter
season
78.09%
season_humidity
0.12cm
season_precpt
-0.50C
season_temp
0.5C
soil_temp
silt loam
soil_texture_class
Hydrometer Method. ASTM D422, 2266
soil_texture_meth
2021-02-03
timepoint
CI-M15e
title
6210ppm
tot_nitro
Combustion by Elementar Vario Max CN Method 3.3 from “Recommended Methods of Manure Analysis” and TMECC method 4.02 (adapted from AOAC 990.03)
tot_nitro_cont_meth
226.7 degrees
wind_direction
3.1 kmph
wind_speed