SAMN45129253
External Id
U.S. Food and Drug Administration
INSDC center name
2024-12-02T00:00:00Z
INSDC first public
2024-12-05T12:04:24.373Z
INSDC last update
SRS23449593
INSDC secondary accession
live
INSDC status
MIGS/MIMS/MIMARKS.food-farm_env
NCBI submission model
MIMS.me
NCBI submission model
MIMS.me.food-farm_env.6.0
NCBI submission package
SRS23449593
SRA accession
farm [ENVO_00000078]
adjacent_environment
none
biotic_regm
none
chem_administration
2020-03-09
collection_date
sterile scoop
collection_method
surface
depth
Metagenome from agricultural soil taken 18 days after amendment with untreated dairy manure. Sample replicate B.
description
not applicable
enrichment_protocol
anthropogenic terrestrial biome [ENVO_01000219]
env_broad_scale
farm [ENVO_00000078]
env_local_scale
agricultural soil [ENVO_00002259]
env_medium
animal manure [AGRO_00000079]
fertilizer_admin
2020-02-21
fertilizer_date
not applicable
food_product_type
USA:Ohio
geo_loc_name
44%
humidity
not applicable
ifsac_category
manure amended agricultural soil
isolation_source
40.7589 N 81.9535 W
lat_lon
soil metagenome
http://purl.obolibrary.org/obo/NCBITaxon_410658
organism
amendment;2020-02-20
perturbation
research
purpose_of_sampling
from the crop-growing fields
rel_location
US FDA
repository
sterile scoop
samp_collect_device
natural environment specimen [GENEPIO_0001250]
samp_mat_type
soil sample was a composite of 5 subsamples taken from the field
samp_pooling
2L
samp_size
natural environment specimen [GENEPIO_0001250]
samp_source_mat_cat
4 degrees during transport; -20 until processing
samp_store_temp
5g
samp_vol_we_dna_ext
winter
season
79.16%
season_humidity
0.24cm
season_precpt
2.07C
season_temp
5.9C
soil_temp
silt loam
soil_texture_class
Hydrometer Method. ASTM D422, 2058
soil_texture_meth
2020-03-09
timepoint
CI-B10b
title
155.4 degrees
wind_direction
3 kmph
wind_speed