Tuck032_A_sed_cytb
EESC_lab_processing_ID
SAMN45166773
External Id
USGS Eastern Ecological Science Center
INSDC center name
2024-12-04T00:00:00Z
INSDC first public
2024-12-06T10:22:20.387Z
INSDC last update
SRS23460492
INSDC secondary accession
live
INSDC status
MIGS/MIMS/MIMARKS.water
NCBI submission model
MIMARKS.survey
NCBI submission model
MIMARKS.survey.water.6.0
NCBI submission package
SRS23460492
SRA accession
2020-07
collection_date
Bottom
depth
Keywords: GSC:MIxS;MIMARKS:6.0
description
NA
eDNA_filter_type
freshwater stream biome [ENVO:03605008]
env_broad_scale
stream bed [ENVO:00000383]
env_local_scale
stream bed [ENVO:00000383]
env_medium
NA
filter_pore_micron_size
USA: Virginia, Tuckahoe Creek, tributary to James River
geo_loc_name
37.6765 N 77.6900 W
lat_lon
Approximately 250 mg of sediment was extracted using the Qiagen Powersoil kit.
nucl_acid_ext
metagenome
http://purl.obolibrary.org/obo/NCBITaxon_256318
organism
FWD(cytb-F):5_GCCTACGCYATYCTHCGMTCHATYCC, REV(cytb-R):5_GGGTGTTCNACNGGYATNCCNCCAATTCA
pcr_primers
Illumina MiSeq with v3 chemistry generating paired end 250 bp reads
seq_meth
mitochondrial cytochrome b fragment
target_gene
Tuck032_A_sed_cytb
title