PROKKA (version 1.14.6)
16S recovery software
Yes
16s recovered
2025-02-17
ENA first public
ERC000047
ENA-CHECKLIST
University of Derby
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS23401691
SRA accession
91b77bb6-a760-4576-a270-dd86adb6cd71
Submitter Id
Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
assembly quality
metaMDBG (version 0.3)
assembly software
coverage; graph
binning parameters
MAGScoT (version 1.0.0); MetaBat (version 2.15); MaxBin (version 2.2.7)
binning software
aquatic biome
broad-scale environmental context
Michael Sweet
collected_by
University of Derby
collecting institution
2023-10-18
collection date
99.93
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
1.78
%
contamination score
1900-06-23T00:00:00.000
culture_or_strain_id
adult coral tissue
environmental medium
United Kingdom
geographic location (country and/or sea)
not collected
DD
geographic location (latitude)
not collected
DD
geographic location (longitude)
University of Derby
geographic location (region and locality)
Aquarium
habitat
adult
host life stage
Acropora hyacinthus
host scientific name
not provided
host sex
55974
host taxid
Jamie Craggs
identified_by
Horniman Museum
identifier_affiliation
metagenome-assembled genome
investigation type
Coral: Acropora hyacinthus
isolation_source
marine biome
local environmental context
coral metagenome
metagenomic source
85
number of standard tRNAs extracted
Acinetobacter sp.
organism
WHOLE ORGANISM
organism part
ToL
project name
SAMEA117702598
sample derived from
Acinetobacter sp.
scientific_name
Pacbio Sequel II
sequencing method
UDUK1666455
specimen_id
NOT PROVIDED
specimen_voucher
N
symbiont
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic classification defined by topology and ANI
taxonomic identity marker
91b77bb6-a760-4576-a270-dd86adb6cd71-asg-MAGScoT_cleanbin_000001
title
jaAcrHyac4.Acinetobacter_sp_1
tolid