PROKKA (version 1.14.6)
16S recovery software
Yes
16s recovered
2025-02-17
ENA first public
ERC000047
ENA-CHECKLIST
University of Derby
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS23401676
SRA accession
ebb03bee-5bc3-4167-9627-03da9fd662bd
Submitter Id
Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
assembly quality
metaMDBG (version 0.3)
assembly software
UNIVERSITY OF DERBY
barcoding center
coverage; graph
binning parameters
MAGScoT (version 1.0.0); MetaBat (version 2.15); MaxBin (version 2.2.7)
binning software
aquatic biome
broad-scale environmental context
Andrew Baird
collected_by
James Cook University
collecting institution
2021-07-09
collection date
96.54
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
3.3
%
contamination score
0.5
m
depth
adult coral tissue
environmental medium
Australia
geographic location (country and/or sea)
-29.66
DD
geographic location (latitude)
153.33
DD
geographic location (longitude)
Solitary Islands
geographic location (region and locality)
intertidal rock pool
habitat
adult
host life stage
Micromussa lordhowensis
host scientific name
not applicable
host sex
1216036
host taxid
Andrew Baird
identified_by
James Cook University
identifier_affiliation
metagenome-assembled genome
investigation type
Coral: Micromussa lordhowensis
isolation_source
marine biome
local environmental context
coral metagenome
metagenomic source
47
number of standard tRNAs extracted
Candidatus Poribacteria bacterium
organism
WHOLE ORGANISM
organism part
2021-07-09
original collection date
Australia | Solitary Islands
original collection location
ASG
project name
SAMEA117702586
sample derived from
Candidatus Poribacteria bacterium
scientific_name
Pacbio Sequel II
sequencing method
UDUK0000283
specimen_id
NA
specimen_voucher
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic classification defined by topology and ANI
taxonomic identity marker
ebb03bee-5bc3-4167-9627-03da9fd662bd-asg-MAGScoT_cleanbin_000006
title
jaMicLord3.Poribacteria_1
tolid