2025-02-18
ENA first public
ERC000050
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS23421208
SRA accession
ERR7163068_concoct_merged.0
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.15.3
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
aquatic
broad-scale environmental context
EBI-EMG
broker name
2015-02-23
collection date
93.98
%
completeness score
EukCC_v2.1.0
completeness software
1.5
%
contamination score
This sample represents a Third Party Annotation (TPA) binned metagenome assembled from the metagenomic run ERR7163068 of study ERP132647.
description
aquaculture
environmental medium
South Korea
geographic location (country and/or sea)
34.42352778
DD
geographic location (latitude)
126.34936111
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
aquaculture metagenome
isolation_source
marine
local environmental context
aquaculture metagenome
metagenomic source
Hypocreales sp.
organism
whole metagenomic sequencing for marine aquaculture microbiomes collected from Jindo, Tongyeong, and Wando, Korea
project name
SAMEA10031319
sample derived from
Hypocreales sp.
scientific_name
Illumina HiSeq 4000
sequencing method
multi-marker approach
taxonomic identity marker
binned metagenome: ERR7163068_concoct_merged.0
title