PROKKA (version 1.14.6)
16S recovery software
Yes
16s recovered
2025-02-20
ENA first public
ERC000047
ENA-CHECKLIST
Geomar Helmholtz Centre
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS23681031
SRA accession
11607e13-6b45-45e8-9653-c7e6250e25ff
Submitter Id
Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
assembly quality
metaMDBG (version 0.3)
assembly software
coverage; graph
binning parameters
MetaBat (version 2.15); DASTOOL (version 1.1.5)
binning software
aquatic biome
broad-scale environmental context
SALLY LEYS
collected_by
University of Alberta
collecting institution
2024-04-02
collection date
96.77
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
1.08
%
contamination score
1
m
depth
adult sponge tissue
environmental medium
Canada
geographic location (country and/or sea)
48.83
DD
geographic location (latitude)
-125.14
DD
geographic location (longitude)
BRITISH COLUMBIA | BAMFIELD | BAMFIELD MARINE SCIENCES CENTRE
geographic location (region and locality)
INTERTIDAL/SUBTIDAL/ROCK/DOCK EXPOSED AND SHELTERED
habitat
adult
host life stage
Haliclona cinerea
host scientific name
not collected
host sex
178541
host taxid
SALLY LEYS
identified_by
University of Alberta
identifier_affiliation
metagenome-assembled genome
investigation type
Sponge: Haliclona cinerea
isolation_source
marine biome
local environmental context
sponge metagenome
metagenomic source
37
number of standard tRNAs extracted
Alphaproteobacteria bacterium
organism
WHOLE ORGANISM
organism part
ASG
project name
SAMEA117740028
sample derived from
Alphaproteobacteria bacterium
scientific_name
Pacbio Sequel II
sequencing method
GHC0000352
specimen_id
NOT PROVIDED
specimen_voucher
N
symbiont
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic classification defined by topology and ANI
taxonomic identity marker
11607e13-6b45-45e8-9653-c7e6250e25ff-asg-bin.18
title
odHalCine1.Alphaproteobacteria_1
tolid