PROKKA (version 1.14.6)
16S recovery software
Yes
16s recovered
2025-02-24
ENA first public
ERC000050
ENA-CHECKLIST
Geomar Helmholtz Centre
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS23743186
SRA accession
c76df381-0b6f-4f39-94a2-1b2402a5b9d0
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaMDBG (version 0.3)
assembly software
coverage; graph
binning parameters
MetaBat (version 2.15); DASTOOL (version 1.1.5)
binning software
aquatic biome
broad-scale environmental context
Yu-Jing Chiou
collected_by
University of New South Wales
collecting institution
2024-02-29
collection date
77.58
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
3.42
%
contamination score
10
m
depth
adult sponge tissue
environmental medium
Australia
geographic location (country and/or sea)
-33.99
DD
geographic location (latitude)
151.23
DD
geographic location (longitude)
New South Wales | Bare Island | Sydney
geographic location (region and locality)
Coastal rocky reef
habitat
adult
host life stage
Callyspongia manus
host scientific name
not collected
host sex
3133881
host taxid
Torsten Thomas
identified_by
University of New South Wales
identifier_affiliation
metagenome-assembled genome
investigation type
Sponge: Callyspongia manus
isolation_source
marine biome
local environmental context
sponge metagenome
metagenomic source
25
number of standard tRNAs extracted
Mariniblastus sp.
organism
WHOLE ORGANISM
organism part
ASG
project name
SAMEA117757469
sample derived from
Mariniblastus sp.
scientific_name
Pacbio Sequel II
sequencing method
GHC0000325
specimen_id
NOT PROVIDED
specimen_voucher
N
symbiont
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
ani_screen
taxonomic identity marker
c76df381-0b6f-4f39-94a2-1b2402a5b9d0-asg-bin.129
title
odCalManu1.Mariniblastus_sp_1
tolid