PROKKA (version 1.14.6)
16S recovery software
Yes
16s recovered
2025-02-26
ENA first public
ERC000050
ENA-CHECKLIST
Geomar Helmholtz Centre
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS23760960
SRA accession
506c1504-728d-4165-bee7-262331c47696
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaMDBG (version 0.3)
assembly software
coverage; graph
binning parameters
MetaBat (version 2.15); DASTOOL (version 1.1.5)
binning software
aquatic biome
broad-scale environmental context
GERT WÖRHEIDE
collected_by
LMU Munich
collecting institution
2021-02-02
collection date
83.99
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
0.02
%
contamination score
0.2
m
depth
adult sponge tissue
environmental medium
Germany
geographic location (country and/or sea)
48.15
DD
geographic location (latitude)
11.56
DD
geographic location (longitude)
Munich | LMU Munich
geographic location (region and locality)
Aquarium
habitat
adult
host life stage
Lendenfeldia chondrodes
host scientific name
not applicable
host sex
279623
host taxid
GERT WÖRHEIDE
identified_by
LMU Munich
identifier_affiliation
metagenome-assembled genome
investigation type
Sponge: Lendenfeldia chondrodes
isolation_source
marine biome
local environmental context
sponge metagenome
metagenomic source
31
number of standard tRNAs extracted
Saprospiraceae bacterium
organism
WHOLE ORGANISM
organism part
ASG
project name
unknown
relationship
SAMEA117775239
sample derived from
Saprospiraceae bacterium
scientific_name
Pacbio Sequel II
sequencing method
GHC0000048
specimen_id
GW1995
specimen_voucher
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic classification fully defined by topology
taxonomic identity marker
506c1504-728d-4165-bee7-262331c47696-asg-bin.56
title
odLenChon1.Saprospiraceae_1
tolid