PROKKA (version 1.14.6)
16S recovery software
Yes
16s recovered
2025-02-27
ENA first public
ERC000050
ENA-CHECKLIST
Geomar Helmholtz Centre
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS23767043
SRA accession
6a1b651a-63b3-4cba-81ee-620dd3bc2b87
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaMDBG (version 0.3)
assembly software
coverage; graph
binning parameters
MAGScoT (version 1.0.0); MetaBat (version 2.15); MaxBin (version 2.2.7)
binning software
aquatic biome
broad-scale environmental context
NICOLE WEBSTER
collected_by
AIMS
collecting institution
2020-09-23
collection date
94.99
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
5.79
%
contamination score
12.0
m
depth
adult sponge tissue
environmental medium
Australia
geographic location (country and/or sea)
18.91
DD
geographic location (latitude)
147.70
DD
geographic location (longitude)
Queensland | Great Barrier Reef | Davies Reef
geographic location (region and locality)
Reef
habitat
adult
host life stage
Ircinia ramosa
host scientific name
not collected
host sex
281041
host taxid
NICOLE WEBSTER
identified_by
AIMS
identifier_affiliation
metagenome-assembled genome
investigation type
Sponge: Ircinia ramosa
isolation_source
marine biome
local environmental context
sponge metagenome
metagenomic source
50
number of standard tRNAs extracted
Candidatus Poribacteria bacterium
organism
WHOLE ORGANISM
organism part
ASG
project name
SAMEA117781306
sample derived from
Candidatus Poribacteria bacterium
scientific_name
Pacbio Sequel II
sequencing method
GHC0000114
specimen_id
NOT PROVIDED
specimen_voucher
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic classification defined by topology and ANI
taxonomic identity marker
6a1b651a-63b3-4cba-81ee-620dd3bc2b87-asg-MAGScoT_cleanbin_000081
title
odIrcRamo1.Poribacteria_1
tolid