PROKKA (version 1.14.6)
16S recovery software
Yes
16s recovered
2025-02-27
ENA first public
ERC000050
ENA-CHECKLIST
Geomar Helmholtz Centre
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS23766187
SRA accession
035b1943-e2e3-4e85-8f0f-21db2a4cf33f
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaMDBG (version 0.3)
assembly software
coverage; graph
binning parameters
DASTOOL (version 1.1.5); MetaBat (version 2.15); MaxBin (version 2.2.7)
binning software
aquatic biome
broad-scale environmental context
KATHRIN BUSCH
collected_by
GEOMAR
collecting institution
2018-08-08
collection date
53.5
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
0.93
%
contamination score
330
m
depth
adult sponge tissue
environmental medium
Germany
geographic location (country and/or sea)
54.19
DD
geographic location (latitude)
10.09
DD
geographic location (longitude)
Kiel | GEOMAR
geographic location (region and locality)
continental shelf
habitat
adult
host life stage
Geodia phlegraei
host scientific name
not applicable
host sex
521093
host taxid
HANS TORE RAPP
identified_by
UiB, Norway
identifier_affiliation
metagenome-assembled genome
investigation type
Sponge: Geodia phlegraei
isolation_source
marine biome
local environmental context
sponge metagenome
metagenomic source
4
number of standard tRNAs extracted
Candidatus Woesearchaeota archaeon
organism
WHOLE ORGANISM
organism part
ASG
project name
beneficial
relationship
SAMEA117780466
sample derived from
Candidatus Woesearchaeota archaeon
scientific_name
Pacbio Sequel II
sequencing method
GHC0000289
specimen_id
NOT PROVIDED
specimen_voucher
N
symbiont
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic novelty determined using RED
taxonomic identity marker
035b1943-e2e3-4e85-8f0f-21db2a4cf33f-asg-bin.1669
title
odGeoPhle1.Woesearchaeota_archaeon_1
tolid