PROKKA (version 1.14.6)
16S recovery software
Yes
16s recovered
2025-02-27
ENA first public
ERC000050
ENA-CHECKLIST
Geomar Helmholtz Centre
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS23766437
SRA accession
eade0910-5db6-475e-8405-005da87bb840
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaMDBG (version 0.3)
assembly software
coverage; graph
binning parameters
MetaBat (version 2.15); DASTOOL (version 1.1.5)
binning software
aquatic biome
broad-scale environmental context
WILLIAM GROSSMAN
collected_by
MARINE BIOLOGICAL LABORATORY
collecting institution
2024-05-20
collection date
50.71
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
0.0
%
contamination score
adult sponge tissue
environmental medium
USA
geographic location (country and/or sea)
41.63
DD
geographic location (latitude)
-70.64
DD
geographic location (longitude)
Massachusettes | North Falmouth
geographic location (region and locality)
collected under a bridge, ~2 ' of water, fast water moving through there during tides, 53F
habitat
juvenile
host life stage
Mycale fibrexilis
host scientific name
not provided
host sex
86016
host taxid
WILLIAM GROSSMAN
identified_by
MARINE BIOLOGICAL LABORATORY
identifier_affiliation
metagenome-assembled genome
investigation type
Sponge: Mycale fibrexilis
isolation_source
marine biome
local environmental context
sponge metagenome
metagenomic source
25
number of standard tRNAs extracted
Acanthopleuribacteraceae bacterium
organism
WHOLE ORGANISM
organism part
ToL
project name
SAMEA117780715
sample derived from
Acanthopleuribacteraceae bacterium
scientific_name
Pacbio Sequel II
sequencing method
GHC0000358
specimen_id
NOT COLLECTED
specimen_voucher
N
symbiont
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic novelty determined using RED
taxonomic identity marker
eade0910-5db6-475e-8405-005da87bb840-asg-bin.204
title
odMycFibr1.Acanthopleuribacteraceae_2
tolid