PROKKA (version 1.14.6)
16S recovery software
Yes
16s recovered
2025-02-27
ENA first public
ERC000050
ENA-CHECKLIST
Geomar Helmholtz Centre
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS23766548
SRA accession
73a077dd-0157-4671-9da1-772e7e5138ce
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaMDBG (version 0.3)
assembly software
coverage; graph
binning parameters
MAGScoT (version 1.0.0); MetaBat (version 2.15); MaxBin (version 2.2.7)
binning software
aquatic biome
broad-scale environmental context
KATHRIN BUSCH
collected_by
GEOMAR
collecting institution
2017-06-23
collection date
82.92
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
3.4
%
contamination score
650
m
depth
adult sponge tissue
environmental medium
Germany
geographic location (country and/or sea)
54.19
DD
geographic location (latitude)
10.09
DD
geographic location (longitude)
Kiel | GEOMAR
geographic location (region and locality)
rock
habitat
adult
host life stage
Neoschrammeniella cf bowerbankii
host scientific name
not applicable
host sex
3381574
host taxid
PILAR RÌOS
identified_by
IEO, Spain
identifier_affiliation
metagenome-assembled genome
investigation type
Sponge: Neoschrammeniella cf bowerbankii
isolation_source
marine biome
local environmental context
sponge metagenome
metagenomic source
41
number of standard tRNAs extracted
Candidatus Latescibacterota bacterium
organism
WHOLE ORGANISM
organism part
ASG
project name
unknown
relationship
SAMEA117780754
sample derived from
Candidatus Latescibacterota bacterium
scientific_name
Pacbio Sequel II
sequencing method
GHC0000291
specimen_id
NOT PROVIDED
specimen_voucher
N
symbiont
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic classification defined by topology and ANI
taxonomic identity marker
73a077dd-0157-4671-9da1-772e7e5138ce-asg-MAGScoT_cleanbin_000182
title
odNeoBowe1.Latescibacterota_10
tolid