PROKKA (version 1.14.6)
16S recovery software
Yes
16s recovered
2025-02-27
ENA first public
ERC000047
ENA-CHECKLIST
Geomar Helmholtz Centre
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS23766834
SRA accession
fbb172c3-de08-4f40-a2cc-29487177e2df
Submitter Id
Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
assembly quality
metaMDBG (version 0.3)
assembly software
coverage; graph
binning parameters
MAGScoT (version 1.0.0); MetaBat (version 2.15); MaxBin (version 2.2.7)
binning software
aquatic biome
broad-scale environmental context
Lennart Melson
collected_by
GEOMAR
collecting institution
2024-02-21
collection date
98.71
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
2.43
%
contamination score
1
m
depth
adult sponge tissue
environmental medium
Germany
geographic location (country and/or sea)
54.19
DD
geographic location (latitude)
10.09
DD
geographic location (longitude)
Kiel | GEOMAR
geographic location (region and locality)
aquarium
habitat
adult
host life stage
Chondrilla australiensis
host scientific name
not applicable
host sex
220711
host taxid
Lennart Melson
identified_by
GEOMAR
identifier_affiliation
metagenome-assembled genome
investigation type
Sponge: Chondrilla australiensis
isolation_source
marine biome
local environmental context
sponge metagenome
metagenomic source
46
number of standard tRNAs extracted
Candidatus Poribacteria bacterium
organism
WHOLE ORGANISM
organism part
ASG
project name
beneficial
relationship
SAMEA117781089
sample derived from
Candidatus Poribacteria bacterium
scientific_name
Pacbio Sequel II
sequencing method
GHC0000321
specimen_id
NOT PROVIDED
specimen_voucher
N
symbiont
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic classification defined by topology and ANI
taxonomic identity marker
fbb172c3-de08-4f40-a2cc-29487177e2df-asg-MAGScoT_cleanbin_000022
title
odChoAust1.Poribacteria_1
tolid