PROKKA (version 1.14.6)
16S recovery software
Yes
16s recovered
2025-03-03
ENA first public
ERC000050
ENA-CHECKLIST
Geomar Helmholtz Centre
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS23775373
SRA accession
9d1b2f4e-8f64-4c2b-b4f4-33abf632b2b3
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaMDBG (version 0.3)
assembly software
coverage; graph
binning parameters
MAGScoT (version 1.0.0); MetaBat (version 2.15); MaxBin (version 2.2.7)
binning software
aquatic biome
broad-scale environmental context
ZHEE SHEEN WONG
collected_by
University of Queensland
collecting institution
2021-01-29
collection date
77.29
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
3.96
%
contamination score
0.4
m
depth
adult sponge tissue
environmental medium
Australia
geographic location (country and/or sea)
-27.49
DD
geographic location (latitude)
153.01
DD
geographic location (longitude)
Queensland | Brisbane | St Lucia
geographic location (region and locality)
UQ Goddard Building (8) aquarium facility
habitat
adult
host life stage
Rhabdastrella globostellata
host scientific name
not collected
host sex
473528
host taxid
ZHEE SHEEN WONG
identified_by
University of Queensland
identifier_affiliation
metagenome-assembled genome
investigation type
Sponge: Rhabdastrella globostellata
isolation_source
marine biome
local environmental context
sponge metagenome
metagenomic source
45
number of standard tRNAs extracted
Chloroflexota bacterium
organism
WHOLE ORGANISM
organism part
ToL
project name
SAMEA117789146
sample derived from
Chloroflexota bacterium
scientific_name
Pacbio Sequel II
sequencing method
GHC0000198
specimen_id
NOT PROVIDED
specimen_voucher
N
symbiont
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic classification defined by topology and ANI
taxonomic identity marker
9d1b2f4e-8f64-4c2b-b4f4-33abf632b2b3-asg-MAGScoT_cleanbin_000110
title
odRhaGlob2.Chloroflexota_1
tolid