SAMN47099436
External Id
Stockholm University
INSDC center name
2025-02-26T00:00:00Z
INSDC first public
2025-02-28T16:50:05.407Z
INSDC last update
live
INSDC status
MIGS/MIMS/MIMARKS.water
NCBI submission model
MIGS.ba
NCBI submission model
MIGS.ba.water.6.0
NCBI submission package
2019-02-28
collection_date
0
depth
Keywords: GSC:MIxS;MIGS:6.0
description
water
env_broad_scale
freshwater
env_local_scale
lake water
env_medium
Sweden: Norrtlje
geo_loc_name
Isolated at 23C on PYE agar in 7 October 2021 from a model community culture established from lake water collected from Lake Erken (Norrtaelje, Sweden). The model community culture had been set up in 28 February 2019 by diluting lake water in dissolved organic matter (DOM) extracted from cultures of the cyanobacterium Microcystis aeruginosa ("DOM02" in Garcia et al., 2022, bioRxiv, https://doi.org/10.1101/2022.03.21.485019). The model community culture had then been back-diluted to 1000 cells/ml in 29 April 2019 with the same DOM, and then left in incubation at 20C in 12-hour light/dark cycles until 7 October 2021.
isol_growth_condt
Lake Erken
isolation_source
59.847455 N 18.577626 E
lat_lon
1
num_replicons
Caulobacter sp. ErkDOM-E
http://purl.obolibrary.org/obo/NCBITaxon_3402778
organism
missing
ref_biomaterial
ErkDOM-E
strain
MIGS Cultured Bacterial/Archaeal sample from Caulobacter sp. ErkDOM-E
title