SAMN47159797
External Id
University of St Andrews
INSDC center name
2025-02-28T00:00:00Z
INSDC first public
2025-02-28T10:55:02.904Z
INSDC last update
SRS24213505
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS24213505
SRA accession
Scottish Mycobacteria Reference Laboratory (SMRL)
collected_by
2010
collection_date
A mycobacterium-like strain was isolated from a male urine sample in 2010 at the Scottish Mycobacteria Reference Laboratory (SMRL), Royal Infirmary of Edinburgh (RIE), UK. The strain was determined to be nontuberculous after the sequencing of its hsp65 gene. The draft genome has a length of 6,778,417 bp, a GC content of 67.14%, and 6,400 coding sequences. An In-Silico analysis found that the closest relative was Mycobacterium vanbaalenii PYR-1, with 83.32% identity.
description
United Kingdom: Scotland
geo_loc_name
Homo sapiens
host
urine
isolation_source
restricted access
lat_lon
Mycobacterium sp. smrl_JER01
http://purl.obolibrary.org/obo/NCBITaxon_3402633
organism
culture
sample_type
smrl_JER01
strain
Mycobacterium sp clinical isolate
title