2025-03-04
ENA first public
ERC000047
ENA-CHECKLIST
KOPRI
INSDC center name
public
INSDC status
ERS23775605
SRA accession
MAG_103
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
MEGAHIT (v1.2.9)
assembly software
completeness > 50%, contamination < 10%
binning parameters
MaxBin2 (v2.2.6), MetaBAT2 (v2.12.1), CONCOCT (v1.0.0)
binning software
polar environment [ENVO:01001703]
broad-scale environmental context
2016-08-01
collection date
83.06
%
completeness score
CheckM (v1.2.2)
completeness software
3.23
%
contamination score
Metagenome-assembled genome from uncultured Planctomycetota bacterium
description
marine sediment [ENVO:03000033]
environmental medium
Arctic Ocean
geographic location (country and/or sea)
75.679442
DD
geographic location (latitude)
-169.735958
DD
geographic location (longitude)
marine sediment
isolation_source
seafloor [ENVO:00000482]
local environmental context
marine sediment metagenome
metagenomic source
uncultured Planctomycetota bacterium
organism
Marine sediment microbiomes of AM6 (SMTZ, 118 cmbsf)
project name
ERS17054890
sample derived from
uncultured Planctomycetota bacterium
scientific_name
multi marker approach
taxonomic identity marker
MAG_103
title